Parental gene: | RABEPK, ENSCJAG00000006849 |
| Aliases: | None |
| Description: | Rab9 effector protein with kelch motifs [Source:HGNC Symbol;Acc:16896] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:169023859..169055805(+) |
>ENSCJAG00000006849
ATGAAGCAGCTGCCCATCTTGGAACCTGGAGACAAGCCCAGGAAAGCATCATGGTACACCTTGACTCTCCAAGGAGACAG
CCCCTGTGCTCGAGTTGGCCACAGCTGTTCATATTTACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCTTCATTGTTG
GGGGAGCAAATCCAAACAGAAGCTTCTCAGATGTGCATGCCATGGATCTCGGAAAACACCAGTGGGACTTAGTTACCTGC
AAGGGCCTCTTGCCCCGGTATGAACATGCTAGCTTCATTCCCTCCTGCACACCTGACAGTATCTGGGTATTTGGAGGTGC
CAACCAATCAGGAAATCGAAATTGTCTACAAGTCCTGAATCCTGAAACCAGGACATGGACCATGCCAGAAGTGACCAGCC
CCCCACCATCCCCAAGAACATTCCACACATCATCAGCAGCCATTGGAAACCAGCTGTATGTCTTTGGGGGCGGAGAGAGA
GGTGCCCAGCCCGTGCAGGATGTGAAGCTGCATGTGTTTGACGCAAGCACTCTGACCTGGTCACAGCCAGAGACACTTGG
AAATCCTCCATCCCCCCGGCACGGTCATGTGATGGTGGCAGCAGGAACAAAGCTCTTCATCCATGGAGGCTTGGCAGGGG
ACAAATTCTATGATGATTTCCACTGCATTGATATAAGTGACATGAAATGGCAGAAGCTAAGTCCCACTGGGGCTACTCCA
GCAGGCTGTGCTGCCCACTCAGCTGTGGCTGTGGGAAAACACTTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACT
GGACACAATGTACCAGTATCACACAGAAAAGCAGCATTGGACTTTGCTTAAGTTTGACACTTTTCTACCCCCTGGACGAT
TGGACCACTCCATGTGTATCATTCCATGGCCAGTGACATGTGCGTCTGAGAAAGAAGATTCCAATTCTCTCAGTCTGAAC
CATGAAGCTGAGAAAGTGGATTCAGCTGACACAGTAATGACCCACAGTGGTGACTCACATGAGGAAAGCCGGGCTGATAC
ACTGCTGTGTTTTGTGTTTGGTGGGATGAATACAGAAGGGGAAATTTATGATGATTGTATTGTGACTGCAGTTGACTAA
ATGAAGCAGCTGCCCATCTTGGAACCTGGAGACAAGCCCAGGAAAGCATCATGGTACACCTTGACTCTCCAAGGAGACAG
CCCCTGTGCTCGAGTTGGCCACAGCTGTTCATATTTACCCCCAGTTGGTAATGCCAAGAGAGGGAAGGTCTTCATTGTTG
GGGGAGCAAATCCAAACAGAAGCTTCTCAGATGTGCATGCCATGGATCTCGGAAAACACCAGTGGGACTTAGTTACCTGC
AAGGGCCTCTTGCCCCGGTATGAACATGCTAGCTTCATTCCCTCCTGCACACCTGACAGTATCTGGGTATTTGGAGGTGC
CAACCAATCAGGAAATCGAAATTGTCTACAAGTCCTGAATCCTGAAACCAGGACATGGACCATGCCAGAAGTGACCAGCC
CCCCACCATCCCCAAGAACATTCCACACATCATCAGCAGCCATTGGAAACCAGCTGTATGTCTTTGGGGGCGGAGAGAGA
GGTGCCCAGCCCGTGCAGGATGTGAAGCTGCATGTGTTTGACGCAAGCACTCTGACCTGGTCACAGCCAGAGACACTTGG
AAATCCTCCATCCCCCCGGCACGGTCATGTGATGGTGGCAGCAGGAACAAAGCTCTTCATCCATGGAGGCTTGGCAGGGG
ACAAATTCTATGATGATTTCCACTGCATTGATATAAGTGACATGAAATGGCAGAAGCTAAGTCCCACTGGGGCTACTCCA
GCAGGCTGTGCTGCCCACTCAGCTGTGGCTGTGGGAAAACACTTGTACATCTTTGGTGGAATGACTCCTGCAGGAGCACT
GGACACAATGTACCAGTATCACACAGAAAAGCAGCATTGGACTTTGCTTAAGTTTGACACTTTTCTACCCCCTGGACGAT
TGGACCACTCCATGTGTATCATTCCATGGCCAGTGACATGTGCGTCTGAGAAAGAAGATTCCAATTCTCTCAGTCTGAAC
CATGAAGCTGAGAAAGTGGATTCAGCTGACACAGTAATGACCCACAGTGGTGACTCACATGAGGAAAGCCGGGCTGATAC
ACTGCTGTGTTTTGTGTTTGGTGGGATGAATACAGAAGGGGAAATTTATGATGATTGTATTGTGACTGCAGTTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .51 RPM |
| SRP051959_skeletal_muscle | 2 .29 RPM |
| SRP051959_lymph_node | 3 .49 RPM |
| SRP051959_lung | 3 .58 RPM |
| SRP051959_liver | 4 .03 RPM |
| SRP051959_kidney | 5 .06 RPM |
| SRP051959_heart | 3 .32 RPM |
| SRP051959_colon | 3 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000020201 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2472 | 84.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006849 retrocopies