Parental gene:

CNIH, ENSCAFG00000031178

Aliases:None
Description:cornichon homolog (Drosophila) [Source:HGNC Symbol;Acc:19431]
Organism:Dog (Canis familiaris)
Coordinates:8:30360099..30380254(-)


>ENSCAFG00000031178
ATGCACCGCACGCTTCCGCCGTCAGAGGGCGCCGGCGCGCCTCGCGCTAGTACGCAGGCGCGCGGCGGGGGGGCGGGCGC
CGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGTCGTGGCTGCGGCCGGGGGAAGTGAATGGTTTTACCCAGAGGGCCCTG
CGCCGCCTTTCTCCGCTGGCAGCGGTGCCGCTCCCTGCTCCTCTCTGCCGGCCATGGCGTTCACGTTCGCGGCCTTCTGC
TACATGCTGGCGCTGCTGCTCACCGCCGCGCTCATCTTCTTCGCCATCTGGCACATTATTGCATTTGATGAACTGAAGAC
TGATTACAAGAATCCTATAGACCAGTGTAATACCCTGAATCCTACAGTTGAAAAGGTCAAAAAGATTAAAAGAGTCAAAA
TTGCATTAAAGCTTGTACTTCCCGAGTACCTCATCCATGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCAGAGTGGCTT
ACACTGGGTCTCAATATGCCCCTCTTGGCGTATCATATTTGGAGCATGATCTATGTTTTGGTGAGCTCTTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 20 .29 RPM
SRP017611_brain 14 .85 RPM
SRP017611_kidney 37 .31 RPM
SRP017611_liver 7 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007306 ortholog_one2many 1 retrogene
retro_cjac_103,
Equus caballus ENSECAG00000026814 ortholog_one2one 1 retrogene
retro_ecab_685,
Loxodonta africana ENSLAFG00000014841 ortholog_one2one 1 retrogene
retro_lafr_963,
Nomascus leucogenys ENSNLEG00000012704 ortholog_one2one 1 retrogene
retro_nleu_1896,
Otolemur garnettii ENSOGAG00000024582 ortholog_one2one 1 retrogene
retro_ogar_2271,
Ochotona princeps ENSOPRG00000005287 ortholog_one2one 4 retrogenes
retro_opri_198, retro_opri_269, retro_opri_366, retro_opri_894,
Tupaia belangeri ENSTBEG00000010265 ortholog_one2one 3 retrogenes
retro_tbel_2080, retro_tbel_3728, retro_tbel_572,
Tarsius syrichta ENSTSYG00000011295 ortholog_one2one 1 retrogene
retro_tsyr_1540,
Tursiops truncatus ENSTTRG00000008259 ortholog_one2one 1 retrogene
retro_ttru_261,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_658 59.50 80.56
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2. retro_cfam_697 96.53 99.31
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Download FASTA sequences of all ENSCAFG00000031178 retrocopies