Parental gene: | CNIH, ENSOPRG00000005287 |
| Aliases: | None |
| Description: | cornichon homolog (Drosophila) [Source:HGNC Symbol;Acc:19431] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_758:48356..59380(-) |
>ENSOPRG00000005287
ATGGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATTATAGCATTTGATGAGCTGAAGACCGATTACAAGAATCCTATAGACCAGTGTAATACCCTGAATCCTCTTGTACTGC
CAGAGTACCTCATCCATGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCAGATCATACACTGGGTCTCAACATGCCCCTC
CTGGCATACCATATTTGGAGGTATATGAGTAGACCGGTGATGAGTGGACCAGGACTCTATGACCCCACAACCATCATGAA
TGCAGATATTCTAGCATATTGTCAGAAAGAAGGATGGTGCAAATTAGCTTTTTATCTTCTATCATTTTTTTACTACTTAT
ATGGCATGATCTATGTGTTGGTGAGCTCTTAG
ATGGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATTATAGCATTTGATGAGCTGAAGACCGATTACAAGAATCCTATAGACCAGTGTAATACCCTGAATCCTCTTGTACTGC
CAGAGTACCTCATCCATGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCAGATCATACACTGGGTCTCAACATGCCCCTC
CTGGCATACCATATTTGGAGGTATATGAGTAGACCGGTGATGAGTGGACCAGGACTCTATGACCCCACAACCATCATGAA
TGCAGATATTCTAGCATATTGTCAGAAAGAAGGATGGTGCAAATTAGCTTTTTATCTTCTATCATTTTTTTACTACTTAT
ATGGCATGATCTATGTGTTGGTGAGCTCTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000031178 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007306 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000026814 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000014841 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012704 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024582 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001589 | within_species_paralog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010265 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011295 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008259 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_198 | 77.12 | 80.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_269 | 55.84 | 50.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_366 | 77.12 | 80.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_894 | 55.84 | 50.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005287 retrocopies