Parental gene:

GABARAPL2, ENSCAFG00000031455

Aliases:None
Description:GABA(A) receptor-associated protein-like 2 [Source:HGNC Symbol;Acc:13291]
Organism:Dog (Canis familiaris)
Coordinates:5:75227054..75241284(-)


>ENSCAFG00000031455
ATGAAGTGGATGTTCAAGGAGGACCACTCGCTGGAACACAGATGCGTGGAATCCGCGAAGATCCGAGCGAAATACCCCGA
CCGCGTTCCGGTGATTGTGGAAAAAGTCTCAGGCTCTCAGATTGTCGACATTGACAAACGGAAGTATTTGGTTCCATCTG
ACATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAAAAGGCAATCTTCCTGTTTGTG
GATAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTATGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGT
GGCCTACAGTGGAGAGAACACTTTTGGCTTCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 209 .32 RPM
SRP017611_brain 80 .66 RPM
SRP017611_kidney 119 .66 RPM
SRP017611_liver 14 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005453 ortholog_one2one 2 retrogenes
retro_amel_1054, retro_amel_1238,
Canis familiaris ENSCAFG00000019909 within_species_paralog 1 retrogene
retro_cfam_1578,
Callithrix jacchus ENSCJAG00000014253 ortholog_one2one 1 retrogene
retro_cjac_146,
Dasypus novemcinctus ENSDNOG00000002240 ortholog_one2one 2 retrogenes
retro_dnov_1755, retro_dnov_2332,
Microcebus murinus ENSMICG00000011981 ortholog_one2one 1 retrogene
retro_mmur_1473,
Mustela putorius furo ENSMPUG00000009894 ortholog_one2one 1 retrogene
retro_mputfur_993,
Mus musculus ENSMUSG00000031950 ortholog_one2one 5 retrogenes
retro_mmus_2637, retro_mmus_2655, retro_mmus_3240, retro_mmus_456, retro_mmus_506,
Rattus norvegicus ENSRNOG00000019425 possible_ortholog 1 retrogene
retro_rnor_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_639 80.00 100.00
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Download FASTA sequences of all ENSCAFG00000031455 retrocopies