Parental gene:

RCHY1, ENSCAFG00000032536

Aliases:None
Description:ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17479]
Organism:Dog (Canis familiaris)
Coordinates:32:67693..93982(-)


>ENSCAFG00000032536
ATGGCGGCTGCGGCGCGGGAAGATGGCGCCCGAGGCCGAGAGCAAGGGCTTAGGGGCTGCGAGCACTACGACAGAGGATG
TCTCCTGAAGGCACCTTGCTGTGACAAACTTTATACTTGTCGGTTGTGTCATGATAACAATGAAGATCATCAGCTAGATC
GCTTTAAAGTAAAGGAAGTGCAGTGCATAAACTGTGAAAAAATTCAACATGCCCAACAGTCCTGTGAAGAATGTAGCACA
TTGTTTGGGGAATATTATTGCAGTATATGCCATCTCTTTGACAAAGACAAGAAGCAGTATCATTGTGAAAACTGTGGAAT
TTGTAGGATTGGTCCAAAGGAAGATTTTTTCCATTGTTTGAAATGTAACTTATGCCTAGCTATGAATCTCCAAGGAAAGC
ACAAGTGTATTGAAAATGTTTCCCGGCAGAATTGTCCAATATGTTTGGAGGACATTCATACATCCCGTGTTGTTGCTCAT
GTCTTGCCATGTGGACATCTTTTACATAGAACATGTTATGAAGAAATGTTGAAAGAAGGCTACAGATGTCCCTTGTGTAT
GCATTCTGCTTTAGATATGACTAGATACTGGAGACAGCTGGATGATGAGGTAGCACAGACTCCTATGCCATCAGAATACC
AGAACATGACTGTGGATATTCTCTGCAATGATTGTAATAGGAGATCTACAGTCCAGTTCCATATATTAGGCATGAAATGT
AATATTTGTGAATCCTACAATACTGCTCAAGCTAAAAGAATTTCACTAGATCAGCAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 20 .71 RPM
SRP017611_brain 11 .99 RPM
SRP017611_kidney 92 .58 RPM
SRP017611_liver 14 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011650 ortholog_one2one 1 retrogene
retro_chof_1142,
Macropus eugenii ENSMEUG00000003266 ortholog_one2one 1 retrogene
retro_meug_1564,
Monodelphis domestica ENSMODG00000019197 ortholog_one2one 2 retrogenes
retro_mdom_314, retro_mdom_991,
Rattus norvegicus ENSRNOG00000002546 ortholog_one2one 2 retrogenes
retro_rnor_1127, retro_rnor_607,
Tursiops truncatus ENSTTRG00000013786 ortholog_one2one 1 retrogene
retro_ttru_1333,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1449 89.21 52.90
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Download FASTA sequences of all ENSCAFG00000032536 retrocopies