Parental gene: | RCHY1, ENSMODG00000019197 |
| Aliases: | None |
| Description: | ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17479] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 5:22615656..22644684(-) |
>ENSMODG00000019197
GTCATCCGCTGTCTGATTCAGGCTCCTTGCTGTGATAAATTTTATATCTGCCGCTTATGCCATGATAACAATGAAGATCA
TCCTCTGGACCGCTTTAAAGTAAAAGAAGTACAGTGTACGAAGTGTGGAAAAATTCAGAATGCTCAACAGATATGTGAAG
AATGTAGCACTGTTTTTGGAGAATATTATTGCAATATCTGCCACCTATTCGACAAAGACAAGAAGCAGTATCATTGTGAG
AAGTGTGGAATTTGTAGGATTGGTCCGAAGGAAGACTTTTTTCACTGTTTGAAATGTAACCTATGCCTATCCTTGAGTCT
CCAAGGGCATCACAAGTGTATTGAGAATGTTTCCAGGCAGAATTGTCCCATATGTTTGGAGGACATTCATACTTCCCGAG
TAGTTGCTCATGTCTTGCCATGTGGGCATCTTCTACACAGAACATGTTATGAAGAAATGTTAAAAGAAGGCTACAGGTGT
CCATTATGTATGCACTCTGCTCTAGACATGACTCGCTATTGGCGGCAGTTGGATAATGAAGTAGCCCAAACTCCAATGCC
AACAGAATATCAGAATATGACTGTGGAAATTCTTTGCAATGATTGCAGTGCCCGCTCTACAGTCCAGTTCCACATATTAG
GAATGAAATGTAAGAGCTGTGAGTCATATAATACTGCCCAGGATGGAGGATGTGGAATTCCTTTAGAACAACAGTGA
GTCATCCGCTGTCTGATTCAGGCTCCTTGCTGTGATAAATTTTATATCTGCCGCTTATGCCATGATAACAATGAAGATCA
TCCTCTGGACCGCTTTAAAGTAAAAGAAGTACAGTGTACGAAGTGTGGAAAAATTCAGAATGCTCAACAGATATGTGAAG
AATGTAGCACTGTTTTTGGAGAATATTATTGCAATATCTGCCACCTATTCGACAAAGACAAGAAGCAGTATCATTGTGAG
AAGTGTGGAATTTGTAGGATTGGTCCGAAGGAAGACTTTTTTCACTGTTTGAAATGTAACCTATGCCTATCCTTGAGTCT
CCAAGGGCATCACAAGTGTATTGAGAATGTTTCCAGGCAGAATTGTCCCATATGTTTGGAGGACATTCATACTTCCCGAG
TAGTTGCTCATGTCTTGCCATGTGGGCATCTTCTACACAGAACATGTTATGAAGAAATGTTAAAAGAAGGCTACAGGTGT
CCATTATGTATGCACTCTGCTCTAGACATGACTCGCTATTGGCGGCAGTTGGATAATGAAGTAGCCCAAACTCCAATGCC
AACAGAATATCAGAATATGACTGTGGAAATTCTTTGCAATGATTGCAGTGCCCGCTCTACAGTCCAGTTCCACATATTAG
GAATGAAATGTAAGAGCTGTGAGTCATATAATACTGCCCAGGATGGAGGATGTGGAATTCCTTTAGAACAACAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032536 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011650 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003266 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002546 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013786 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_314 | 65.26 | 79.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_991 | 71.07 | 50.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019197 retrocopies