Parental gene:

ZCCHC10, ENSCHOG00000001420

Aliases:None
Description:zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4996:4699..8109(-)


>ENSCHOG00000001420
GAAGCAAATAAGCAACATGTAAGATGTCAGAAATGCTTAGAATTTGGACACTGGACTTACGAATGCACAGGAAAAAGGAA
ATACCTACACAGGCCTTCAAGAACAGCAGAACTAAAGAAAGCTTTAAAAGAAAAAGAAAACAGATTATTATTACAGCAAA
GCATTGGAGAAACTAATGTAGAAAAAAAGAACAAGAAAAAAAGGTCTAAGAGTGTAACCAGTTCCAGTACCAATAGCAGT
GACAGTTCAGCCAGTGATTCTTCATCAGAAAGTGAAGGAACATCTACCTCATCCTCCTCAGAGGATAGTGACACTGACGA
AAGCTCTTCTAGTCCATCATCTTCAGCTTCCTCCACAAGCTCTTCCTCCTCCTCTGATTCAGACTCAGATTCCAGCTCCT
CCAGTAGCAGTACCACCAGCACAGATAGCAGCTCTGAGGATGAACCACCAAAGAAGAAGAAAAAGAAATAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031203 ortholog_one2one 1 retrogene
retro_cfam_643,
Dasypus novemcinctus ENSDNOG00000017302 ortholog_one2one 1 retrogene
retro_dnov_257,
Myotis lucifugus ENSMLUG00000011366 ortholog_one2many 4 retrogenes
retro_mluc_172, retro_mluc_2240, retro_mluc_2241, retro_mluc_2574,
Monodelphis domestica ENSMODG00000013827 ortholog_one2one 1 retrogene
retro_mdom_1405,
Mus musculus ENSMUSG00000018239 ortholog_one2many 1 retrogene
retro_mmus_269,
Otolemur garnettii ENSOGAG00000032171 ortholog_one2one 1 retrogene
retro_ogar_3011,
Pongo abelii ENSPPYG00000015776 ortholog_one2one 1 retrogene
retro_pabe_2395,
Rattus norvegicus ENSRNOG00000006943 ortholog_one2one 3 retrogenes
retro_rnor_2037, retro_rnor_2528, retro_rnor_801,
Sorex araneus ENSSARG00000007221 ortholog_one2one 1 retrogene
retro_sara_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_501 94.23 100.00
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2. retro_chof_790 72.61 99.36
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3. retro_chof_923 70.44 100.00
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4. retro_chof_1243 71.88 82.05
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5. retro_chof_1263 81.53 100.00
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6. retro_chof_1773 83.23 100.00
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7. retro_chof_2048 82.19 91.67
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8. retro_chof_2132 79.86 88.46
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9. retro_chof_2183 81.25 80.13
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Download FASTA sequences of all ENSCHOG00000001420 retrocopies