Parental gene:

TWF1, ENSCHOG00000008386

Aliases:None
Description:twinfilin actin-binding protein 1 [Source:HGNC Symbol;Acc:9620]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4694:2870..21267(-)


>ENSCHOG00000008386
ATGACGCGCGGAGGCCGGCAGAGGAGCCTCCACTTCCTGGAACCGCCGGCCGGGGCCGCTGGCTGCAGTCAGTGGCGGAT
CCCGGAGCCCGCGGCTGCCGCCATGTCCCACCAGACCGGCATCCAAGCTAGTGAAGATGTTAAAGATATCTTTGCCAGAG
CAAGAAATGGAAAATACAGACTTCTGAAAATATCTATTGAAAATGAGCAACTTGTGATTGGGTCATGTAGTCAACCTTCA
GATTCCTGGGATAAGGATTATGATTCCTTTGTTCTACCCCTCCTGGAGGACAAACAACCATGCTATATATTATTCAGATT
AGATTCCCAGAATGCCCAGGGATATGAATGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAGAAAATGT
TGTATGCAGCAACAAGAGCAACTCTAAAGAAGGAGTTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAG
GAAGATGTATCATTACATGGATATAAAAAATATTTGCTATCACAATCTTCCCCTGCCCCGTTGACTGCAGCAGAGGAAGA
ATTACGACAAATTAAAATTAATGAGGTACAAACTGATGTGAGTGTGGACACTAAGCATCAAACACTACAAGGGGTAGCAT
TTCCTATTTCTCAGGAAGCTTTTCAGGCTTTGGAAAAATTGAATAACAGACAGCTCAACTATGTGCAGTTGGAAATAGAT
ATAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTAAAAGATTTGCCAAAGAGGATTCCCAGAGATTC
AGCACGTTATCACTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTGGAGTCCATAGTTTTTATTTATTCAATGC
CTGGATATACATGCAGTATAAAAGAACGGATGTTGTATTCTAGCTGCAAGAGCCCTCTGCTAGAAATTGTAGAACGACAA
CTACAAATGGATGTAATTAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAAGAAGCATA
CCCCAAGCAACATGCTCAGAAGCCAAGTTTTGCAAAACCAAGAGGTCCTGCAGGAAAAAGAGGAATTCTAAGACTAATTG
GTGGTCCAGCTGAAACTGAAGCCACTACTGATTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017332 ortholog_one2one 1 retrogene
retro_amel_1224,
Homo sapiens ENSG00000151239 ortholog_one2one 2 retrogenes
retro_hsap_1819, retro_hsap_4916,
Monodelphis domestica ENSMODG00000018535 ortholog_one2many 1 retrogene
retro_mdom_167,
Mustela putorius furo ENSMPUG00000000364 ortholog_one2one 1 retrogene
retro_mputfur_1629,
Mus musculus ENSMUSG00000022451 ortholog_one2one 1 retrogene
retro_mmus_2961,
Nomascus leucogenys ENSNLEG00000017931 ortholog_one2one 1 retrogene
retro_nleu_2877,
Otolemur garnettii ENSOGAG00000007525 ortholog_one2one 1 retrogene
retro_ogar_1058,
Pan troglodytes ENSPTRG00000004846 ortholog_one2one 1 retrogene
retro_ptro_3279,
Rattus norvegicus ENSRNOG00000022507 ortholog_one2one 1 retrogene
retro_rnor_2176,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_391 90.57 95.83
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2. retro_chof_509 82.21 53.39
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3. retro_chof_1525 83.24 97.40
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4. retro_chof_2013 81.29 75.78
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5. retro_chof_2569 81.87 97.40
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Download FASTA sequences of all ENSCHOG00000008386 retrocopies