Parental gene:

SNAI1, ENSCJAG00000000518

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:43873350..43878681(+)


>ENSCJAG00000000518
CATGCCGCGCTCTTTTTCTTGTCAGAAGCCCTCGACTCCAATCGGAGGCCTAACTACAGCGAGCTGCAGACTCTATCCAA
GTTTACTTTCCAGCAGCCCTATGACCAGGCCCACCTGCTGGCAGCCATCCCACCTCCGGAGATCCTCAACCCCACGGCCT
CGCTGCCAACGCTCATCTGGGACTCTGTCCTGGCCCCCCAAGCCCAGCCAACTGCCTGGGCCTCCCTTCGGGCCCAGGAG
AGCCCCAGGGCGGCAGAGCTGACCTCCCTGTCAGATGAGGACAGCGGGAAAGGCTCCCAGCCCCCCAGCCCACCCTCACC
GGCTTCTTCGTCCTTCTCTTCCACTTCGGCCTCTTCCTTGGAGGCCGAGGCCTATGCTGTCTTCCCAGGCTTGGTCCAAG
TGCCCAAGCAGCTGGCCCAGCTCTCTGAGGCCAAGGATCTCCAGTCTCGAAAGGCCTTCAACTGCAAATACTGCAACAAG
GAATACCTCAGCCTGGGTGCCCTGAAGATGCACATCCGAAGCCACACGCTGCCCTGCGTCTGTGGCACCTGTGGGAAGGC
CTTCTCTAGGCCCTGGCTGCTGCAAGGCCACGTCCGGACCCACACTGGCGAGAAGCCCTTCTCCTGTCCCCACTGCAGCC
GTGCCTTTGCCGACCGCTCCAACCTGCGGGCCCACCTCCAGACCCACTCGGACGTCAAGAAGTACCAGTGCCAGGCATGC
GCTCGGACCTTCTCCCGAATGTCCCTGCTCCACAAGCACCAAGAGTCCGGCTGCTCAGGATGCCCTCGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 0 .50 RPM
SRP051959_skeletal_muscle 0 .57 RPM
SRP051959_lymph_node 0 .05 RPM
SRP051959_lung 0 .62 RPM
SRP051959_liver 0 .13 RPM
SRP051959_kidney 0 .27 RPM
SRP051959_heart 0 .30 RPM
SRP051959_colon 0 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000015053 ortholog_one2many 2 retrogenes
retro_mluc_117, retro_mluc_726,
Macaca mulatta ENSMMUG00000019719 ortholog_one2one 1 retrogene
retro_mmul_214,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2770 76.21 100.00
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Download FASTA sequences of all ENSCJAG00000000518 retrocopies