Parental gene:

NIT2, ENSCJAG00000000590

Aliases:None
Description:nitrilase family, member 2 [Source:HGNC Symbol;Acc:29878]
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:96490013..96508601(-)


>ENSCJAG00000000590
TCTTCAGCTTTCCGCTTGGCCCTCATCCAGCTTCACATTTCTTCCATCAAATCAGAAAACGTCACTCGAGCTTGTAGCCT
CATCCGGGAAGCAGCAACACAAGGAGCCAAAATAGTTTCTTTGCCGGAATGCTTCAATTCTCCATATGGAGTGAAATATT
TTCCTGAATATGCAGAGAAAATTCCTGGTGAATCCACACAGAAGCTTTCTGAAGTAGCAAAGGAATGCAGCATATATCTC
ATTGGAGTGAAAGGCTCTATCCCTGAAGAGGATGCTGGGAAACTCTATAACACCTGTACTGTGTTTGGGCCTGATGGAAC
TTTACTAGCAAAGTACAGAAAGATCCATCTGTTTGACATTGATGTTCCTGGGAAAATTACATTTCAAGAATCTAAAACAT
TGAGCCCGGGTGATAGTTTCTCCACGTTTGATACTCCTTACTGCAGAGTGGGTCTGGGCATCTGCTATGACATGCGGTTT
GCAGAGCTTGCACAGATCTACACACAGAGAGGCTGCCAGCTATTGGTATATCCAGGAGCTTTCAATCTGACCACTGGACC
AGCCCATTGGGAATTGCTTCAACGAGGCAGAGCTGTTGATAATCAGGTGTATGTGGCCACAGTGTCACCTGCCCGGGATG
ACAAAGCCTCCTATGTTGCCTGGGGACACAGCACCGTGGTGAACCCTTGGGGAGAGGTCCTAGCCAAAGCGGGCACAGAA
GAAACAATCATGTATTCAGACATAGACTTGAAGAAGCTGGCTGAAATACGCCAGCAAATCCCCATTTTTAGACAGAAGCG
ATCAGACCTGTATGCAGTGGAGATGAAAAAGCCCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 23 .99 RPM
SRP051959_skeletal_muscle 16 .92 RPM
SRP051959_lymph_node 13 .38 RPM
SRP051959_lung 13 .58 RPM
SRP051959_liver 143 .59 RPM
SRP051959_kidney 92 .47 RPM
SRP051959_heart 16 .05 RPM
SRP051959_colon 7 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003980 ortholog_one2one 1 retrogene
retro_amel_1002,
Homo sapiens ENSG00000114021 ortholog_one2one 1 retrogene
retro_hsap_411,
Gorilla gorilla ENSGGOG00000003724 ortholog_one2one 1 retrogene
retro_ggor_406,
Macaca mulatta ENSMMUG00000020024 ortholog_one2one 2 retrogenes
retro_mmul_1758, retro_mmul_505,
Mustela putorius furo ENSMPUG00000011450 ortholog_one2one 1 retrogene
retro_mputfur_805,
Nomascus leucogenys ENSNLEG00000002631 ortholog_one2one 1 retrogene
retro_nleu_1009,
Pan troglodytes ENSPTRG00000015161 ortholog_one2one 1 retrogene
retro_ptro_315,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3014 69.19 74.82
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Download FASTA sequences of all ENSCJAG00000000590 retrocopies