Parental gene:

BUB3, ENSCJAG00000001066

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:111083050..111094101(+)


>ENSCJAG00000001066
ATGACCGGTTCTAACGAGTTCAAGCTGAACCAGCCACCCGAGGATGGCATCTCCTCGGTGAAGTTCAGCCCCAACACCTC
CCAGTTCCTGCTTGTCTCCTCCTGGGACACGTCGGTGCGCCTCTACGATGTGCCGGCCAACTCCATGCGGCTCAAGTACC
AGCACACCGGCGCGGTCTTGGACTGCGCCTTCTACGATCCAACGCATGCTTGGAGTGGAGGGCTAGATCATCAATTGAAA
ATGCATGATTTGAACACTGATCAAGAAAATCTTGTTGGGACCCATGATGCTCCTATCAGATGTGTTGAATACTGTCCAGA
AGTGAATGTGATGGTTACTGGAAGTTGGGATCAGACAGTTAAATTGTGGGATCCCAGAACTCCTTGTAATGCCGGGACCT
TCTCTCAGCCTGAAAAGGTATATACCCTCTCGGTGTCTGGAGACCGGCTGATTGTGGGAACAGCAGGCCGCAGAGTGTTG
GTGTGGGACTTACGGAACATGGGTTACGTGCAGCAGCGCAGGGAGTCCAGCCTGAAATACCAGACTCGCTGCATACGAGC
GTTTCCAAACAAGCAGGGTTATGTATTAAGTTCCATTGAAGGCCGAGTGGCAGTTGAGTATTTGGATCCAAGTCCTGAGA
TACAGAAGAAGAAATATGCCTTCAAATGTCACAGACTAAAAGAAAATAATATTGAGCAGATTTACCCAGTCAATGCCATT
TCTTTTCACAATATCCACAATACATTTGCCACAGGTGGTTCCGATGGCTTTGTAAATATTTGGGATCCATTTAACAAAAA
GCGGTTGTGCCAGTTCCATCGGTACCCCACGAGCATCGCATCACTTGCCTTCAGTAATGATGGGACTACGCTTGCAATAG
CATCATCATATATGTATGAAATGGATGACACGGAACATCCTGAAGATGGTATCTTCATTCGCCAAGTGACAGATGCAGAA
ACAAAACCCAAGTCACCATGTACTTGA

Library Parental gene expression (RPM)
SRP051959_spleen 34 .20 RPM
SRP051959_skeletal_muscle 18 .93 RPM
SRP051959_lymph_node 44 .70 RPM
SRP051959_lung 27 .36 RPM
SRP051959_liver 25 .60 RPM
SRP051959_kidney 23 .69 RPM
SRP051959_heart 20 .45 RPM
SRP051959_colon 34 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012700 ortholog_one2one 1 retrogene
retro_cfam_399,
Cavia porcellus ENSCPOG00000011957 ortholog_one2one 1 retrogene
retro_cpor_997,
Homo sapiens ENSG00000154473 ortholog_one2one 1 retrogene
retro_hsap_3887,
Gorilla gorilla ENSGGOG00000023971 ortholog_one2one 1 retrogene
retro_ggor_2614,
Myotis lucifugus ENSMLUG00000017732 ortholog_one2one 1 retrogene
retro_mluc_627,
Macaca mulatta ENSMMUG00000003092 ortholog_one2one 1 retrogene
retro_mmul_1729,
Nomascus leucogenys ENSNLEG00000027075 ortholog_one2one 1 retrogene
retro_nleu_1887,
Procavia capensis ENSPCAG00000007736 ortholog_one2one 1 retrogene
retro_pcap_412,
Pongo abelii ENSPPYG00000002731 ortholog_one2one 1 retrogene
retro_pabe_3168,
Ictidomys tridecemlineatus ENSSTOG00000021785 ortholog_one2one 1 retrogene
retro_itri_1095,
Tarsius syrichta ENSTSYG00000013444 ortholog_one2one 2 retrogenes
retro_tsyr_1652, retro_tsyr_732,
Tursiops truncatus ENSTTRG00000016194 ortholog_one2one 1 retrogene
retro_ttru_1136,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3085 78.16 52.44
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Download FASTA sequences of all ENSCJAG00000001066 retrocopies