Parental gene:

MRPL40, ENSCJAG00000001584

Aliases:None
Description:mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:14491]
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:183839085..183843510(+)


>ENSCJAG00000001584
ATGACTACTTCTGTGCTGCGAGGCGTCTCGCTACTAGCTCTGCGCCCGACGAGCGGGCTTCTGGGAACTTGGCAGACGCA
GATTAGGGACTCCCACCAGCGAGCTTCATTGCTGTCCTTCTGGGAAGTTATTCCCATGAGATCAGAACCTGTTCGAAAGA
AGAAGAAGGTAGATCCTAAAAAAGACCAAGCAGTAAAGGACCGCTTGAAAAGGAGGATCCGAAAACTGGAAAAGGCTAGT
CAAGAGCTAATTCCTATTGAAGATTTTATTACCCCTATAAAGTTCTTGGATAAAACAAGACAGAGGCCTCAGGTGGAGCT
CTCCTTTGAGGAGACTGAGCGGAGAGCTCTGCTTCTGAAGAAGTGGTCCTTGTACAAGCAGCAAGAGCATGAGATGGAGA
GGGACACCATCAGGGCCATGCTAGAAGCCCAGCAAGAAGCTCTGGAGGAACTACGACTCGAGTCCCCGAAGCTCCATGCT
GAGGCTGTCAAGCGGGATTCCAACCTGTTCCCCTTTGAGAGGGAAGGGCCACATTACACACCACCTATCCCTAACTACCA
GCCCCCTGAAGGCAGGTACAATGACATCACCAAGGTGTACACACAAGTGGAGTTTAAGAGATAA

Library Parental gene expression (RPM)
SRP051959_spleen 6 .53 RPM
SRP051959_skeletal_muscle 16 .97 RPM
SRP051959_lymph_node 5 .82 RPM
SRP051959_lung 5 .27 RPM
SRP051959_liver 12 .39 RPM
SRP051959_kidney 7 .50 RPM
SRP051959_heart 17 .52 RPM
SRP051959_colon 5 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001053 ortholog_one2one 1 retrogene
retro_acar_149,
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2one 1 retrogene
retro_amel_257,
Equus caballus ENSECAG00000009876 ortholog_one2one 1 retrogene
retro_ecab_687,
Homo sapiens ENSG00000185608 ortholog_one2one 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2one 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_one2many 1 retrogene
retro_mluc_1950,
Macaca mulatta ENSMMUG00000016081 ortholog_one2many 1 retrogene
retro_mmul_57,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2one 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2one 1 retrogene
retro_nleu_899,
Pongo abelii ENSPPYG00000011578 ortholog_one2one 1 retrogene
retro_pabe_857,
Rattus norvegicus ENSRNOG00000049686 ortholog_one2one 1 retrogene
retro_rnor_1624,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2one 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3220 62.92 84.54
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Download FASTA sequences of all ENSCJAG00000001584 retrocopies