Parental gene: | ENSCJAG00000002621 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:28305940..28312699(-) |
>ENSCJAG00000002621
ATGTCTGCAGCAGGTGGGGAGGCTCCTGGGGACACGGATGGAGAGGGCACTGCTGCTGCGGGTCGGTTCAGCTTCAGCCC
GGAGCCCACGCTCGAGGACATCCGCCGCCTCCATGCTGAGTTTGCTGCTGAACGAGACTGGGAACAGTTCCATCAGCCTC
GGAACCTCCTCCTGGCCTTGGTCGGGGAAGTTGGGGAGCTGGCAGAACTCTTTCAGTGGAAGACCGATGGGGAGCCTGGC
CCCCAAGGCTGGTCCTCCAGGGAACGGGCTGCCCTTCAAGAGGAGCTTAGTGATGTCCTTATCTACCTGGTGGCATTAGC
AGCCCGCTGCCGTGTGGATCTGCCCCAAGCAGTGCTCTCCAAAATGGACATCAACCGTCGCCGCTACCCAGCCCATCTGG
CCCGCAGCTCTTCCCGCAAGTATACAGAATTGCCCCACGGGACCATCTCTGAAGACCAGGCTATGGGGCCCTCGGATCTT
CCCTGTGACTCCACGGGCCAGGCCTCAACCTAG
ATGTCTGCAGCAGGTGGGGAGGCTCCTGGGGACACGGATGGAGAGGGCACTGCTGCTGCGGGTCGGTTCAGCTTCAGCCC
GGAGCCCACGCTCGAGGACATCCGCCGCCTCCATGCTGAGTTTGCTGCTGAACGAGACTGGGAACAGTTCCATCAGCCTC
GGAACCTCCTCCTGGCCTTGGTCGGGGAAGTTGGGGAGCTGGCAGAACTCTTTCAGTGGAAGACCGATGGGGAGCCTGGC
CCCCAAGGCTGGTCCTCCAGGGAACGGGCTGCCCTTCAAGAGGAGCTTAGTGATGTCCTTATCTACCTGGTGGCATTAGC
AGCCCGCTGCCGTGTGGATCTGCCCCAAGCAGTGCTCTCCAAAATGGACATCAACCGTCGCCGCTACCCAGCCCATCTGG
CCCGCAGCTCTTCCCGCAAGTATACAGAATTGCCCCACGGGACCATCTCTGAAGACCAGGCTATGGGGCCCTCGGATCTT
CCCTGTGACTCCACGGGCCAGGCCTCAACCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .99 RPM |
| SRP051959_skeletal_muscle | 1 .59 RPM |
| SRP051959_lymph_node | 2 .21 RPM |
| SRP051959_lung | 1 .04 RPM |
| SRP051959_liver | 1 .26 RPM |
| SRP051959_kidney | 0 .91 RPM |
| SRP051959_heart | 0 .95 RPM |
| SRP051959_colon | 2 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000016594 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013774 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011361 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017850 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007796 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_43 | 89.22 | 98.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_676 | 90.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002621 retrocopies