Parental gene: | UQCRC1, ENSCJAG00000003132 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:24290163..24299992(-) |
>ENSCJAG00000003132
ATGGCGGCGTCCGTAGTCTGCCGGGCCGCTAGCACCGGGGCACAAGTGCTCCTGCGCACTAGCCGCTCGCCGGCCCTGCT
GCGGACGCCAGCCTTGCGGAGTACGGCAACCTTCGCTCAGGCGCTCCAGTTTGTGCCGGAGACGCAGGTTAGCAAACTGG
ACAACGGCCTGCGTGTGGCCTCGGAGCAGTCCTCCCAGCCCACTTGCACGGTGGGAGTGTGGATTGATGTTGGCAGCCGT
TTTGAGACTGAGAAGAACAATGGGGCAGGCTACTTTGTGGAGCATCTGGCTTTCAAGGGAACAAAGAATCGGCCTGGCAG
TACCCTGGAGAAGGAGGTGGAGAGCATAGGGGCCCATCTTAATGCCTACAGCACCCGAGAGCACACAGCTTACTACATCA
AGGCGCTGTCCAAGGATCTGCCAAAAGTTGTGGAGATCCTGGGTGACATTGTGCAGAACTGTAGCCTGGAAGACTCACAG
ATCGAGAAGGAACGTGATGTGATCCTGCGGGAGATGCAGGAGAATGATGCCTCTATGCGAGACGTGGTCTTTGACTACCT
GCATGCCACAGCATTCCAGGGCACGTCTCTAGCCCAGGCTGTGGAGGGGACCAGTGAGAATGTCAGGAAGCTGTCTCGTG
CAGACTTGACTGAGTACCTCAGCAGGCATTACAAGGCCCCTCGAATGGTGCTGGCAGCTGCGGGAGGAGTGGAGCACCAG
CAGCTGTTAGACCTTGCTCAGAAGCACCTTGGTGACATCTCTTGGCAGTACCCAGAGGATGCTGTGCCTGCTTTTACTCC
ATGCCGCTTCACTGGCAGTGAGATCCGCCACCGTGATGATGCTCTACCTTTAGCCCACGTGGCCATTGCAGTAGAGGGTC
CTGGCTGGGCCAACCCGGACAATGTGGCCTTGCAAGTGGCCAATGCCATCATCGGCCACTATGACTGCACTTATGGTGGT
GGCGCGCACCTGTCCAGCCCACTGGCTTCAATCGTTGCGGCCAAGAAGCTGTGCCAGAGTTTCCAGACCTTCAACATCTG
CTATGCAGAAACGGGCTTGCTGGGTGCACACTTTGTCTGTGACCGAATGAAAATCGATGACATGATCTATGTGCTGCAAG
GCCAGTGGATGCGCCTGTGTACCAGTACCACGGAGAGTGCGGTGGCTCGGGGCAAAAACATCCTCAGAAATGCCCTGGTA
TCTCAGCTAGACGGCACTACTCCCGTGTGTGAGGACATTGGACGCAGCCTCCTGACCTATGGCCGCCGCATTCCCCTGGC
TGAATGGGAAAGCCGGATTTCGGAGGTAGATGCCAGTGTGGTGCGTGAGATCTGTTCCAAGTACTTCTATGACCAGTGCC
CAGCAGTGGCTGGATATGGCCCCATCGAGCAGCTCACAGACTACAACCGGATCCGTAGTGGCATGTTCTGGCTGCGCTTC
TAG
ATGGCGGCGTCCGTAGTCTGCCGGGCCGCTAGCACCGGGGCACAAGTGCTCCTGCGCACTAGCCGCTCGCCGGCCCTGCT
GCGGACGCCAGCCTTGCGGAGTACGGCAACCTTCGCTCAGGCGCTCCAGTTTGTGCCGGAGACGCAGGTTAGCAAACTGG
ACAACGGCCTGCGTGTGGCCTCGGAGCAGTCCTCCCAGCCCACTTGCACGGTGGGAGTGTGGATTGATGTTGGCAGCCGT
TTTGAGACTGAGAAGAACAATGGGGCAGGCTACTTTGTGGAGCATCTGGCTTTCAAGGGAACAAAGAATCGGCCTGGCAG
TACCCTGGAGAAGGAGGTGGAGAGCATAGGGGCCCATCTTAATGCCTACAGCACCCGAGAGCACACAGCTTACTACATCA
AGGCGCTGTCCAAGGATCTGCCAAAAGTTGTGGAGATCCTGGGTGACATTGTGCAGAACTGTAGCCTGGAAGACTCACAG
ATCGAGAAGGAACGTGATGTGATCCTGCGGGAGATGCAGGAGAATGATGCCTCTATGCGAGACGTGGTCTTTGACTACCT
GCATGCCACAGCATTCCAGGGCACGTCTCTAGCCCAGGCTGTGGAGGGGACCAGTGAGAATGTCAGGAAGCTGTCTCGTG
CAGACTTGACTGAGTACCTCAGCAGGCATTACAAGGCCCCTCGAATGGTGCTGGCAGCTGCGGGAGGAGTGGAGCACCAG
CAGCTGTTAGACCTTGCTCAGAAGCACCTTGGTGACATCTCTTGGCAGTACCCAGAGGATGCTGTGCCTGCTTTTACTCC
ATGCCGCTTCACTGGCAGTGAGATCCGCCACCGTGATGATGCTCTACCTTTAGCCCACGTGGCCATTGCAGTAGAGGGTC
CTGGCTGGGCCAACCCGGACAATGTGGCCTTGCAAGTGGCCAATGCCATCATCGGCCACTATGACTGCACTTATGGTGGT
GGCGCGCACCTGTCCAGCCCACTGGCTTCAATCGTTGCGGCCAAGAAGCTGTGCCAGAGTTTCCAGACCTTCAACATCTG
CTATGCAGAAACGGGCTTGCTGGGTGCACACTTTGTCTGTGACCGAATGAAAATCGATGACATGATCTATGTGCTGCAAG
GCCAGTGGATGCGCCTGTGTACCAGTACCACGGAGAGTGCGGTGGCTCGGGGCAAAAACATCCTCAGAAATGCCCTGGTA
TCTCAGCTAGACGGCACTACTCCCGTGTGTGAGGACATTGGACGCAGCCTCCTGACCTATGGCCGCCGCATTCCCCTGGC
TGAATGGGAAAGCCGGATTTCGGAGGTAGATGCCAGTGTGGTGCGTGAGATCTGTTCCAAGTACTTCTATGACCAGTGCC
CAGCAGTGGCTGGATATGGCCCCATCGAGCAGCTCACAGACTACAACCGGATCCGTAGTGGCATGTTCTGGCTGCGCTTC
TAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .37 RPM |
| SRP051959_skeletal_muscle | 131 .51 RPM |
| SRP051959_lymph_node | 21 .16 RPM |
| SRP051959_lung | 22 .32 RPM |
| SRP051959_liver | 62 .77 RPM |
| SRP051959_kidney | 66 .05 RPM |
| SRP051959_heart | 84 .02 RPM |
| SRP051959_colon | 66 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021200 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000025651 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2204 | 85.80 | 67.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003132 retrocopies