Parental gene:

ENSCJAG00000021200

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:71670799..71687645(+)


>ENSCJAG00000021200
ATGGCGGCGGCAGCGACTCGAGCGGTTCTGCTACCCGGGGTGCGGCGGCGGTTGTGGGGTTTCAGCGAGAGGCTGCTGAT
CCGAGGTGCTGCAGGACGGTCATCATATTTTGGAGAGAATAGATTGAGGAGTACACAGGCTGCTACACAAGTTGTTCTGA
ATGTTCCTGAAACAAGAGTAACATGTTTAGAAAGTGGACTTAGAGTGGCCTCTGAAGACTCTGGGCTCTCAACATGCACA
GTTGGACTCTGGATTGATGCTGGAAGTAGATATGAAAATGAGAAGAATAATGGAACAGCTCACTTTCTGGAGCATATGGC
TTTCAAGGGCACCAAAAAGAGATCCCAGTTAGATTTGGAACTTGAGATTGAAAACATGGGTGCTCATCTCAATGCCTATA
CCTCCAGAGAGCAGACCGTATACTATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATC
ATACAAAACAGCACACTGGGAGAAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAGATGCAAGAAGTTGAAAC
CAATTTACAAGAAGTTGTTTTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATTTTGGGAC
CAACTGAAAATATCAAATCTATAAGTCGTAAGGACTTAGTGGATTATATAACCACACATTACAAGGGGCCAAGAATAGTT
CTTGCTGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTGCATTTTGGTGACTCTTTATGCACACA
CAAAGGAGAAATACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGAGATTCGTATGAGGGATGACAAGATGCCTTTGG
CACACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATATGTCTTATGGTTGCAAACACGCTGATT
GGCAACTGGGATCGCTCTTTTGGAGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTGTCAGGGCAACCTTTG
CCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAACCAGCCACCG
TTGGAGACATGCTACATGTTGTTCAGAAAGAATGGATGCGACTCTGTACAAGTGTCACTGAAAGTGAGGTTGCACGAGCC
AGAAATCTTCTGAAAACAAACATGTTGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAGATATTGGTAGGCAGATGTT
ATGCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAGTAAGAATTGATGCTGTGAATGCTGAGACAATTCGAGAAGTAT
GTACCAAATATATTTATAATAAGAGTCCAGCTATTGCTGCTGTTGGTCCCATTGAGCAACTACCAGATTTTAATCAGATT
TGCAGTAACATGTGTTGGCTTCGTGATTAA

Library Parental gene expression (RPM)
SRP051959_spleen 14 .73 RPM
SRP051959_skeletal_muscle 24 .63 RPM
SRP051959_lymph_node 16 .37 RPM
SRP051959_lung 14 .53 RPM
SRP051959_liver 19 .95 RPM
SRP051959_kidney 25 .14 RPM
SRP051959_heart 19 .29 RPM
SRP051959_colon 12 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003132 within_species_paralog 1 retrogene
retro_cjac_2204,
Myotis lucifugus ENSMLUG00000008798 ortholog_many2many 1 retrogene
retro_mluc_43,
Rattus norvegicus ENSRNOG00000012693 ortholog_one2many 1 retrogene
retro_rnor_2963,
Tursiops truncatus ENSTTRG00000010699 ortholog_one2many 1 retrogene
retro_ttru_1171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_228 100.00 98.57
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Download FASTA sequences of all ENSCJAG00000021200 retrocopies