Parental gene:

ARIH2, ENSCJAG00000003305

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:24604930..24672370(+)


>ENSCJAG00000003305
ATGTCCGTGGACATGAATAGCCAGGGGTCTGACAGCAATGAAGAGGACTATGACCCAAATTGTGAGGAAGAGGAAGAAGA
GGACGAAGACCCTGGAGACATAGAGGACTATTACGTGGGAGTGGCCAGCGATGTGGAACAGCAGGGGGCTGATGCCTTTG
ATCCTGAGGAGTACCAGTTCACTTGCTTGACCTACAAGGAATCTGAGGGTGCCCTCAATGAGCACATGACCAGCTTAGCC
TCTGTTCTAAAGGTATCTCATTCAGTTGCTAAACTTATATTAGTTAATTTCCACTGGCAAGTTTCAGAGATATTGGACAG
ATACAAGTCCAATTCTGCTCAACTGCTCGTTGAGGCTCGAGTTCAGCCTAATCCATCAAAACATGTTTCCACATCCCATC
CCCCTCACCACTGTGCAGTGTGTATGCAGTTTGTGCGAAAGGAAAACCTACTCTCTCTGGCCTGTCAGCACCAGTTTTGC
CGAAGCTGCTGGGAACAGCACTGCTCAGTTCTTGTCAAGGACGGCGTGGGCGTGGGAGTCTCTTGTATGGCTCAGGACTG
TCCGCTCCGTACACCAGAGGACTTTGTGTTTCCATTGCTTCCCAATGAAGAATTGAGAGAGAAATACAGGCGCTACCTCT
TCAGGGACTATGTGGAGAGTCATTACCAGCTCCAGCTGTGCCCTGGTGCAGACTGCCCCATGGTTATTCGGGTACAGGAG
CCTAGAGCTCGCCGAGTACAGTGCAATCGGTGCAACGAGGTCTTCTGTTTCAAGTGTCGTCAGATGTATCATGCACCCAC
AGACTGCGCCACTATCCGGAAATGGCTCACGAAGTGTGCAGATGACTCTGAAACAGCCAACTACATTAGTGCTCACACTA
AAGACTGTCCCAAGTGCAACATCTGCATTGAGAAGAATGGAGGCTGCAATCATATGCAATGCTCCAAATGTAAACACGAC
TTCTGCTGGATGTGTCTAGGAGATTGGAAGACTCATGGCAGTGAATACTATGAGTGCAGTCGTTACAAGGAGAATCCTGA
CATTGTGAACCAGAGCCAACAAGCCCAGGCAAGGGAAGCCCTCAAGAAGTACTTATTCTACTTTGAGAGGTGGGAAAACC
ACAACAAAAGCTTGCAGCTAGAGGCACAGACATACCAGCGGATTCACGAGAAGATTCAGGAGAGGGTCATGAACAATCTG
GGGACATGGATCGACTGGCAGTACCTACAGAATGCTGCCAAGCTCTTGGCCAAGTGTCGATACACCCTGCAATACACCTA
CCCATATGCATATTACATGGAGTCTGGACCCAGGAAGAAGCTGTTTGAATACCAGCAGGCTCAGCTGGAGGCTGAGATTG
AAAACCTCTCATGGAAAGTGGAGCGTGCGGACAGCTATGACAGAGGGGACTTGGAGAACCAGATGCATATAGCGGAGCAG
AGGAGGAGAACCCTGCTGAAGGATTTCCATGACACCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 31 .64 RPM
SRP051959_skeletal_muscle 45 .40 RPM
SRP051959_lymph_node 36 .73 RPM
SRP051959_lung 36 .73 RPM
SRP051959_liver 23 .09 RPM
SRP051959_kidney 29 .37 RPM
SRP051959_heart 41 .08 RPM
SRP051959_colon 21 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013035 ortholog_one2one 1 retrogene
retro_amel_1021,
Homo sapiens ENSG00000177479 ortholog_one2one 1 retrogene
retro_hsap_1876,
Gorilla gorilla ENSGGOG00000017134 ortholog_one2one 1 retrogene
retro_ggor_1373,
Myotis lucifugus ENSMLUG00000013946 ortholog_one2one 1 retrogene
retro_mluc_1869,
Mustela putorius furo ENSMPUG00000014344 ortholog_one2one 1 retrogene
retro_mputfur_610,
Mus musculus ENSMUSG00000064145 ortholog_one2one 1 retrogene
retro_mmus_795,
Nomascus leucogenys ENSNLEG00000006710 ortholog_one2one 1 retrogene
retro_nleu_1228,
Oryctolagus cuniculus ENSOCUG00000017699 ortholog_one2one 1 retrogene
retro_ocun_1838,
Pongo abelii ENSPPYG00000013890 ortholog_one2one 1 retrogene
retro_pabe_1557,
Pan troglodytes ENSPTRG00000014902 ortholog_one2one 1 retrogene
retro_ptro_1259,
Ictidomys tridecemlineatus ENSSTOG00000001766 ortholog_one2one 1 retrogene
retro_itri_1047,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1106 79.87 62.20
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Download FASTA sequences of all ENSCJAG00000003305 retrocopies