Parental gene: | TPST1, ENSCJAG00000004198 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:959560..1105714(-) |
>ENSCJAG00000004198
ATGGTTGGAAAGCTGAAGCAGAACTTACTATTGGCATGTCTGGTGATTAGTTCTGTGACCGTGTTTTACTTGGGCCAACA
TGCCATGGAATGCCACCACCGGATAGAAGAACGCAGCCAACCAGTCAAATCAGAGAGCACAAGGGCCACTGTGAGAACTG
GCCTGGACTTCAAAGCCAATAAAACCTTTGCCTATCACAAAGATATGCCTTTAATATTTATTGGAGGTGTGCCTCGGAGT
GGAACCACACTCATGAGGGCCATGCTGGATGCGCATCCTGACATTCGCTGTGGAGAGGAAACCAGGGTCATTCCCCGAAT
CCTGGCCCTGAAGCAGATGTGGTCACGGTCAAGTAAAGAGAAGATCCGGTTGGATGAGGCTGGTGTCACTGACGAAGTGC
TGGATTCTGCCATGCAAGCCTTCTTGCTAGAAATCATCGTTAAGCATGGGGAGCCAGCCCCTTATTTATGTAATAAAGAT
CCTTTTGCCCTGAAATCCTTAACTTACCTTGCTAGGTTGTTCCCCAATGCCAGATTTCTCCTGATGGTCCGAGATGGCCG
GGCATCAGTACATTCGATGATTTCTCGAAAAGTTACTATAGCTGGATTTGACCTGAACAGCTACAGGGACTGCTTGACCA
AGTGGAATCGTGCCATAGAGACCATGTATAACCAGTGTATGGAGGTTGGTTATAAAAAGTGCATGTTGGTTCACTATGAA
CAGCTTGTCTTACATCCTGAACGGTGGATGAGAACACTCTTAAAGTTCCTCCAGATTCCCTGGAACCACTCGGTGCTGCA
CCACGAAGAGATGATTGGGAAAGCTGGGGGCGTGTCTCTGTCGAAAGTGGAGAGATCTACAGACCAAGTCATCAAGCCAG
TCAATATAGGAGCTCTATCAAAATGGGTTGGGAAGATACCACCAGATGTTTTGCAAGACATGGCAGTGATTGCTCCTATG
CTTGCTAAACTTGGATATGACCCGTATGCCAACCCACCTAACTACGGAAAACCTGATCCCAAAATTCTTGAAAACACTCG
AAGGGTCTATAAGGGAGAATTCCAGCTACCTGACTTTCTTAAAGAAAAACCACAGACTGAGCAAGTGGAGTAG
ATGGTTGGAAAGCTGAAGCAGAACTTACTATTGGCATGTCTGGTGATTAGTTCTGTGACCGTGTTTTACTTGGGCCAACA
TGCCATGGAATGCCACCACCGGATAGAAGAACGCAGCCAACCAGTCAAATCAGAGAGCACAAGGGCCACTGTGAGAACTG
GCCTGGACTTCAAAGCCAATAAAACCTTTGCCTATCACAAAGATATGCCTTTAATATTTATTGGAGGTGTGCCTCGGAGT
GGAACCACACTCATGAGGGCCATGCTGGATGCGCATCCTGACATTCGCTGTGGAGAGGAAACCAGGGTCATTCCCCGAAT
CCTGGCCCTGAAGCAGATGTGGTCACGGTCAAGTAAAGAGAAGATCCGGTTGGATGAGGCTGGTGTCACTGACGAAGTGC
TGGATTCTGCCATGCAAGCCTTCTTGCTAGAAATCATCGTTAAGCATGGGGAGCCAGCCCCTTATTTATGTAATAAAGAT
CCTTTTGCCCTGAAATCCTTAACTTACCTTGCTAGGTTGTTCCCCAATGCCAGATTTCTCCTGATGGTCCGAGATGGCCG
GGCATCAGTACATTCGATGATTTCTCGAAAAGTTACTATAGCTGGATTTGACCTGAACAGCTACAGGGACTGCTTGACCA
AGTGGAATCGTGCCATAGAGACCATGTATAACCAGTGTATGGAGGTTGGTTATAAAAAGTGCATGTTGGTTCACTATGAA
CAGCTTGTCTTACATCCTGAACGGTGGATGAGAACACTCTTAAAGTTCCTCCAGATTCCCTGGAACCACTCGGTGCTGCA
CCACGAAGAGATGATTGGGAAAGCTGGGGGCGTGTCTCTGTCGAAAGTGGAGAGATCTACAGACCAAGTCATCAAGCCAG
TCAATATAGGAGCTCTATCAAAATGGGTTGGGAAGATACCACCAGATGTTTTGCAAGACATGGCAGTGATTGCTCCTATG
CTTGCTAAACTTGGATATGACCCGTATGCCAACCCACCTAACTACGGAAAACCTGATCCCAAAATTCTTGAAAACACTCG
AAGGGTCTATAAGGGAGAATTCCAGCTACCTGACTTTCTTAAAGAAAAACCACAGACTGAGCAAGTGGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .37 RPM |
| SRP051959_skeletal_muscle | 2 .34 RPM |
| SRP051959_lymph_node | 6 .76 RPM |
| SRP051959_lung | 4 .57 RPM |
| SRP051959_liver | 42 .24 RPM |
| SRP051959_kidney | 18 .75 RPM |
| SRP051959_heart | 5 .31 RPM |
| SRP051959_colon | 5 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Xiphophorus maculatus | ENSXMAG00000007886 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2241 | 86.67 | 56.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004198 retrocopies