Parental gene:

UAP1, ENSCJAG00000004264

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:25290415..25329236(+)


>ENSCJAG00000004264
ATGAACATTGATGACCTCCAACTCAGGTTGTCCAAAGCTGGGCAAGAACACCTACTACGTTTCTGGAATGAACTTGAAGA
AGCCCAACAGGTAGAACTTCATGCAGAGCTCCAGGCCATGAACTTTGAGGAGCTGAACTTATTTTTCCAAAAGGCAATTG
AAGGATTTAACCAGTCCTCTCAGCAAAAGAATGTGGATGCTCGAATGGAACCTGTGCCTCGGGAGGTGTTGGGCAGTGCT
ACACGGGATCAAGATCAGCTCCAGGCCTGGGAAAGTGAAGGACTTTCCCAGATTTCTCAGAATAAAGTAGCAGTTCTTCT
TCTAGCTGGTGGGCAGGGGACAAGACTCGGCGTTGCATATCCTAAGGGGATGTATGATGTTGGTTTGCCATCCCATAAGA
CACTTTTCCAGATTCAAGCAGAGCGTATCCTGAAGCTACAACAGGTGGCTGAAAAATACTATGGAAACAAATGCATTATT
CCATGGTATATAATGACCAGTGGCAGGACAATGGAATCTACCAAGGAATTCTTCACCAAGCACAAGTACTTTGGTTTAAA
AAAAGAGAATGTTATATTTTTTCAGCAAGGAATGCTCCCTGCCATGAGTTTTGATGGGAAAATTATTTTGGAAGAGAAGA
ATAAAGTTTCTATGGCTCCAGATGGGAATGGTGGTCTTTATCGGGCACTTGCAGCCCAGAATATTGTGGAGGATATGGAG
CAAAGAGGCATTTGGAGCATTCATGTCTATTGTGTTGACAACATATTAGTAAAAGTGGCAGACCCACGGTTCATTGGATT
TTGCATTCAGAAAGGAGCAGACTGTGGAGCAAAGGTGGTAGAGAAAACGAACCCTACAGAACCAGTCGGAGTGGTTTGCC
GAGTGGATGGAGTTTACCAGGTGGTCGAATATAGTGAGATTTCCCTGGCAACAGCTCAAAAACGAAGCTCAGATGGACGA
CTGCTGTTTAATGCGGGGAACATTGCCAACCATTTCTTCACTGTACCATTTCTGAGAGATGTTGTCAATGTTTATGAACC
CCAGTTGCAGCACCATGTGGCTCAAAAGAAGATCCCTTATGTGGATACCCGAGGACAGTTAATTAAGCCAGACAAACCCA
ATGGAATAAAGATGGAAAAGTTTGTCTTTGACATCTTCCAGTTTGCAAAGAAGTTTGTGGTATATGAAGTATTACGGGAA
GATGAGTTTTCCCCACTAAAGAATGCTGACAGTCAGAATGGAAAAGACAATCCTACTACTGCAAGGCATGCTTTGATGTC
CCTTCATCATTGCTGGGTCCTCAATGCAGGGGGCCACTTCATAGATGAAAATGGCTCTCGCCTTCCAGCAATTCCCCGCA
GTGCTACAATTGGGAAGTCAGAGACCATCACAGCTGATGTCAATCACAACTTGAAGGATGCCAATGATGTACCAATCCAG
TGTGAAATCTCTCCTCTTATCTCCTATGCTGGAGAAGGATTAGAAAGTTATGTGGCAGATAAAGAATTCCATGCACCTCT
AATCATCGATGAGAATGGAGTTCATGAGCTGGTGAAAAATGGTATTTGA

Library Parental gene expression (RPM)
SRP051959_spleen 23 .61 RPM
SRP051959_skeletal_muscle 13 .56 RPM
SRP051959_lymph_node 20 .68 RPM
SRP051959_lung 23 .12 RPM
SRP051959_liver 38 .69 RPM
SRP051959_kidney 24 .18 RPM
SRP051959_heart 35 .92 RPM
SRP051959_colon 80 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000004568 ortholog_one2one 5 retrogenes
retro_cpor_1186, retro_cpor_1187, retro_cpor_1188, retro_cpor_1189, retro_cpor_511,
Dasypus novemcinctus ENSDNOG00000024661 ortholog_one2one 1 retrogene
retro_dnov_1035,
Macaca mulatta ENSMMUG00000019514 ortholog_one2one 1 retrogene
retro_mmul_1238,
Tarsius syrichta ENSTSYG00000002725 ortholog_one2one 3 retrogenes
retro_tsyr_121, retro_tsyr_390, retro_tsyr_582,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2537 75.54 81.58
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Download FASTA sequences of all ENSCJAG00000004264 retrocopies