Parental gene: | RAD23A, ENSCJAG00000004494 |
| Aliases: | None |
| Description: | RAD23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:9812] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:12154150..12161875(+) |
>ENSCJAG00000004494
GTTGCATGTTGTGTGAGGATCCCGGGGCCGCCGCGTTCGGGCCCCGCCATGGCCGTCACCATCACGCTCAAAACGCTGCA
GCAGCAGACCTTCAAGATCCGCATGGAGCCGAAAGTAGAAGTGAAGGTACTAAAGGAGAAGATAGAAGCAGAGAAAGGTC
GTGATGCTTTCCCCGTGGCTGGACAGAAACTTATTTATGCCGGCAAGATCTTGAGCGATGATGTTCCCATCAGGGACTAT
CGCATTGATGAGAAGAATTTTGTAGTCGTCATGGTGACCAAGACCAAAGCTGGCCAGGGTACCTCAGCACCCCCAGAGGC
CTCACCCACAGCTGCCCCAGAGTCCTCTACATCCTTCCTGCCCGCCCCTACCTCAGGCATGTCCCATCCCCCACCTGCCG
CCAGAGAGGACAAGAGCCCGTCGGAGGAATCCGCCCCCACGACGTCCCCAGAGTCCGTGTCAGGCTCTGTTCCCTCTTCA
GGTAGCAGCGGGCGAGAGGAAGACGCAGCCTCCACGCTAGTGACGGGCTCTGAGTATGAGACGATGCTCACGGAGATCAT
GTCCATGGGCTATGAGCGGGAGCGGGTCGTGGCCGCCCTGAGAGCCAGCTACAACAACCCCCACCGAGCCGTGGAGTATC
TGCTCACGGGAATTCCTGGGAGCCCCGAGCCAGAACACGGTTCTGTCCAGGAGAGCCAGGTATCCGAGCAGCCGGCCACG
GAAGCAGCAGGAGAGAACCCCCTGGAGTTCCTGCGGGACCAGCCCCAGTTCCAGAACATGCGGCAGGTGATTCAGCAGAA
CCCTGCACTGCTGCCTGCTCTGCTCCAACAGCTGGGCCAGGAGAACCCTCAGCTTTTGCAGCAAATTAGCCGGCACCAGG
AGCAGTTCATCCAGATGCTGAACGAACCCCCTGGGGAGCTGGCGGACATCTCAGATGTGGAGGCAGAGGTGGGTGCCATA
GGAGAGGAGGCCCCGCAGATGAACTACATCCAGGTGACGCCGCAGGAGAAAGAAGCTATAGAGAGGTTGAAGGCCCTGGG
GTTCCCAGAGAGCCTGGTTATCCAGGCCTATTTCGCGTGTGAAAAAAACGAAAACTTGGCTGCCAACTTCCTCTTGAGTC
AGAACTTTGATGACGAGTGA
GTTGCATGTTGTGTGAGGATCCCGGGGCCGCCGCGTTCGGGCCCCGCCATGGCCGTCACCATCACGCTCAAAACGCTGCA
GCAGCAGACCTTCAAGATCCGCATGGAGCCGAAAGTAGAAGTGAAGGTACTAAAGGAGAAGATAGAAGCAGAGAAAGGTC
GTGATGCTTTCCCCGTGGCTGGACAGAAACTTATTTATGCCGGCAAGATCTTGAGCGATGATGTTCCCATCAGGGACTAT
CGCATTGATGAGAAGAATTTTGTAGTCGTCATGGTGACCAAGACCAAAGCTGGCCAGGGTACCTCAGCACCCCCAGAGGC
CTCACCCACAGCTGCCCCAGAGTCCTCTACATCCTTCCTGCCCGCCCCTACCTCAGGCATGTCCCATCCCCCACCTGCCG
CCAGAGAGGACAAGAGCCCGTCGGAGGAATCCGCCCCCACGACGTCCCCAGAGTCCGTGTCAGGCTCTGTTCCCTCTTCA
GGTAGCAGCGGGCGAGAGGAAGACGCAGCCTCCACGCTAGTGACGGGCTCTGAGTATGAGACGATGCTCACGGAGATCAT
GTCCATGGGCTATGAGCGGGAGCGGGTCGTGGCCGCCCTGAGAGCCAGCTACAACAACCCCCACCGAGCCGTGGAGTATC
TGCTCACGGGAATTCCTGGGAGCCCCGAGCCAGAACACGGTTCTGTCCAGGAGAGCCAGGTATCCGAGCAGCCGGCCACG
GAAGCAGCAGGAGAGAACCCCCTGGAGTTCCTGCGGGACCAGCCCCAGTTCCAGAACATGCGGCAGGTGATTCAGCAGAA
CCCTGCACTGCTGCCTGCTCTGCTCCAACAGCTGGGCCAGGAGAACCCTCAGCTTTTGCAGCAAATTAGCCGGCACCAGG
AGCAGTTCATCCAGATGCTGAACGAACCCCCTGGGGAGCTGGCGGACATCTCAGATGTGGAGGCAGAGGTGGGTGCCATA
GGAGAGGAGGCCCCGCAGATGAACTACATCCAGGTGACGCCGCAGGAGAAAGAAGCTATAGAGAGGTTGAAGGCCCTGGG
GTTCCCAGAGAGCCTGGTTATCCAGGCCTATTTCGCGTGTGAAAAAAACGAAAACTTGGCTGCCAACTTCCTCTTGAGTC
AGAACTTTGATGACGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 14 .85 RPM |
| SRP051959_skeletal_muscle | 72 .48 RPM |
| SRP051959_lymph_node | 14 .29 RPM |
| SRP051959_lung | 16 .28 RPM |
| SRP051959_liver | 12 .56 RPM |
| SRP051959_kidney | 16 .77 RPM |
| SRP051959_heart | 19 .43 RPM |
| SRP051959_colon | 9 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016908 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3896 | 85.83 | 96.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004494 retrocopies