Parental gene: | MTCH1, ENSCJAG00000005273 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:37898363..37916354(-) |
>ENSCJAG00000005273
CATGGGGGCCTCGGACCCGGAAGTGGCGCCCTGGGCTCGCGGCGGTGCCGCGGGCGCGATCCACCGCCCGCGCACCGCGC
ACATCCGCGCCACCCTCGGCCTGCGGCTCAGCCCTCGGCCCGCAGGATGGACGGCGGATCGGGGGGCCTGGGGTCTGGGG
ACAACGCCCCGACCACTGAGGCGCTTTTCGTGGCACTGGGCGCGGGCGTGACTGCGCTTAGCCATCCGCTGCTCTACGTG
AAGCTGCTCATCCAGGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGTGCTGGGGAGGAAGGTCCTCTATCT
GCCAAGCTTCTTCACCTACGCCAAGTACATTGTGCAAGTGGATGGTAAGATAGGGCTGTTCCGAGGCCTGAGCCCCCGGC
TGATGTCCAACGCTCTCTCCACTGTGACCCGGGGTAGCATGAAGAAGGTTTTCCCTCCAGATGAGATCGAGCAGGTTTCC
AACAAGGATGACATGAAGACTTCTCTGAAGAAAGTTGTGAAGGAGACCTCCTATGAGATGATGATGCAGTGCGTGTCCCG
CATGTTGGCCCACCCCCTGCATGTCATCTCAATGCGCTGCATGGTCCAGTTTGTGGGACGGGAGGCCAAGTACAGTGGTG
TGCTGAGCTCCATTGGGAAGATTTTCAAGGAGGAAGGGCTGCTGGGATTCTTTGTTGGATTAATCCCTCACCTCCTGGGC
GATGTGGTTTTCTTGTGGGGCTGTAACCTGCTGGCCCACTTCATCAATGCCTACCTGGTGGATGACAGCGTGAGTGACAC
CCCAGGGGGGCTGGGAAACGACCAGAATCCAGGTTCCCAGTTCAGCCAGGCCCTGGCTATCCGGAGCTATACCAAGTTCG
TGATGGGGATCGCAGTGAGCATGCTGACCTACCCCTTCCTGCTAGTCGGCGACCTCATGGCTGTGAACAACTGCGGGCTG
CAGGCTGGGCTCCCACCTTACTCCCCGGTGTTCAAATCCTGGATTCACTGCTGGAAGTACCTGAGCGTGCAGGTGAGCAA
GTACTGGACGGAGGAGGCCTTTCCTGTTGTTTGCCACATCCTTCAGCTGAAATGGTTTTGTGGATGCTTCATGGCATGGA
AAGATATGTGGTTTCATGGAACCCAATGCTGTGAGGAGACACTTAGTATATATAAGGCATTTAAATTAAATTTTCATCTT
ACCCAATTTCAGAAAGGATTTGAGGTTGGCTAA
CATGGGGGCCTCGGACCCGGAAGTGGCGCCCTGGGCTCGCGGCGGTGCCGCGGGCGCGATCCACCGCCCGCGCACCGCGC
ACATCCGCGCCACCCTCGGCCTGCGGCTCAGCCCTCGGCCCGCAGGATGGACGGCGGATCGGGGGGCCTGGGGTCTGGGG
ACAACGCCCCGACCACTGAGGCGCTTTTCGTGGCACTGGGCGCGGGCGTGACTGCGCTTAGCCATCCGCTGCTCTACGTG
AAGCTGCTCATCCAGGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGTGCTGGGGAGGAAGGTCCTCTATCT
GCCAAGCTTCTTCACCTACGCCAAGTACATTGTGCAAGTGGATGGTAAGATAGGGCTGTTCCGAGGCCTGAGCCCCCGGC
TGATGTCCAACGCTCTCTCCACTGTGACCCGGGGTAGCATGAAGAAGGTTTTCCCTCCAGATGAGATCGAGCAGGTTTCC
AACAAGGATGACATGAAGACTTCTCTGAAGAAAGTTGTGAAGGAGACCTCCTATGAGATGATGATGCAGTGCGTGTCCCG
CATGTTGGCCCACCCCCTGCATGTCATCTCAATGCGCTGCATGGTCCAGTTTGTGGGACGGGAGGCCAAGTACAGTGGTG
TGCTGAGCTCCATTGGGAAGATTTTCAAGGAGGAAGGGCTGCTGGGATTCTTTGTTGGATTAATCCCTCACCTCCTGGGC
GATGTGGTTTTCTTGTGGGGCTGTAACCTGCTGGCCCACTTCATCAATGCCTACCTGGTGGATGACAGCGTGAGTGACAC
CCCAGGGGGGCTGGGAAACGACCAGAATCCAGGTTCCCAGTTCAGCCAGGCCCTGGCTATCCGGAGCTATACCAAGTTCG
TGATGGGGATCGCAGTGAGCATGCTGACCTACCCCTTCCTGCTAGTCGGCGACCTCATGGCTGTGAACAACTGCGGGCTG
CAGGCTGGGCTCCCACCTTACTCCCCGGTGTTCAAATCCTGGATTCACTGCTGGAAGTACCTGAGCGTGCAGGTGAGCAA
GTACTGGACGGAGGAGGCCTTTCCTGTTGTTTGCCACATCCTTCAGCTGAAATGGTTTTGTGGATGCTTCATGGCATGGA
AAGATATGTGGTTTCATGGAACCCAATGCTGTGAGGAGACACTTAGTATATATAAGGCATTTAAATTAAATTTTCATCTT
ACCCAATTTCAGAAAGGATTTGAGGTTGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 20 .17 RPM |
| SRP051959_skeletal_muscle | 37 .15 RPM |
| SRP051959_lymph_node | 16 .00 RPM |
| SRP051959_lung | 29 .82 RPM |
| SRP051959_liver | 21 .53 RPM |
| SRP051959_kidney | 35 .01 RPM |
| SRP051959_heart | 28 .15 RPM |
| SRP051959_colon | 25 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020213 | within_species_paralog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2480 | 70.04 | 60.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4182 | 88.32 | 70.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005273 retrocopies