Parental gene:

DNPH1, ENSCJAG00000005337

Aliases:None
Description:2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:HGNC Symbol;Acc:21218]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:44552604..44557328(-)


>ENSCJAG00000005337
ATGGCTGCTGCCGGGGCGCGGGGGATCGGCGAACACGGGGAGCTGGGGGAGCCCGGCCGCCCGGCCCTGTACTTCTGCGG
GAGCATCCGCGGCGGACGCGAGGACCGGGCTCTATATGAGCGGATCGTGACTCGGCTGCGGCGATTCGGGACTGTGCTCA
CCGAGCACGTGGCGGCCGCCGAGCTGGGCCAGCGTGCCACAGGGGAAGAGGCTGCTGGGGATGACAGGCTCATCCATGAG
CAGGACTTGGCGTGGCTGCAGCAGGCGGACAGGGTCGTCGCAGAAGTGACACAGCCATCCTTGGGTGTTGGCTATGAGCT
GGGCCGGGCTGTGGCCCTCAACAAGCGGATCCTGTGCCTGTTCCGCCCACAGTCCGGTAGAGTGCTTTCGGCCATGATCC
GGGGAGCAGCAGATGGCTCTCGGATCCAGGTGTGGGACTATGAGGAGGGAGAGGTAGAGGCCCTGCTGGATCGATACTTC
GAGGCTGATCCTCCAGGGCAAGTGGCTGCCTCCCCTGACCCAACCACTTGA

Library Parental gene expression (RPM)
SRP051959_colon 1 .00 RPM
SRP051959_heart 0 .33 RPM
SRP051959_kidney 0 .42 RPM
SRP051959_liver 0 .80 RPM
SRP051959_lung 0 .13 RPM
SRP051959_lymph_node 0 .41 RPM
SRP051959_skeletal_muscle 0 .09 RPM
SRP051959_spleen 0 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012390 ortholog_one2one 1 retrogene
retro_amel_1012,
Bos taurus ENSBTAG00000019913 ortholog_one2one 1 retrogene
retro_btau_518,
Canis familiaris ENSCAFG00000001837 ortholog_one2one 1 retrogene
retro_cfam_1148,
Equus caballus ENSECAG00000006660 ortholog_one2one 1 retrogene
retro_ecab_595,
Felis catus ENSFCAG00000009722 ortholog_one2one 1 retrogene
retro_fcat_365,
Homo sapiens ENSG00000112667 ortholog_one2one 1 retrogene
retro_hsap_2562,
Nomascus leucogenys ENSNLEG00000000516 ortholog_one2one 1 retrogene
retro_nleu_1515,
Pongo abelii ENSPPYG00000016635 ortholog_one2one 1 retrogene
retro_pabe_1888,
Pan troglodytes ENSPTRG00000029662 ortholog_one2one 1 retrogene
retro_ptro_1493,
Pteropus vampyrus ENSPVAG00000008743 ortholog_one2one 1 retrogene
retro_pvam_1400,
Rattus norvegicus ENSRNOG00000018397 ortholog_one2many 1 retrogene
retro_rnor_580,
Tursiops truncatus ENSTTRG00000007022 ortholog_one2one 1 retrogene
retro_ttru_1520,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3948 64.81 60.23
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Download FASTA sequences of all ENSCJAG00000005337 retrocopies