Parental gene: | DEPTOR, ENSCJAG00000005497 |
| Aliases: | DEPTOR, DEPDC6 |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 16:74862236..75042476(-) |
>ENSCJAG00000005497
ATGGAAGAGGGCAGCAGCGCTGGCAGCGCTGGCAGTGACAGCCGCACCAGCGGGAGCGGCGGGGCGCAGCAAAGAGAGCT
GGAGCGCATGGCTGAGGTCTTGGTCACCGGGGAGCAGCTACGGCTCAGGCTGCATGAAGAAAAGGTTATTAAAGATAGAC
GTCATCATCTCAAGACCTACCCAAACTGTTTTGTCGCAAAAGAACTGATTGACTGGCTGATTGAACACAAAGAGGCTTCC
GACAGAGAGACGGCAATTAAACTCATGCAGAAATTAGCAGACCGGGGCATTATTCACCATGTGTGTGATGAGCATAAGGA
ATTCAAGGATGTCAAACTCTTCTACCGCTTTAGAAAGGATGACGGCACCTTCCCATTGGATAACGAAGTGAAGGCCTTTA
TGAGAGGACAGAGGCTGTATGAAAAGCTGATGAGCCCTGAAAACACACTTCTCCAGCCCAGGGAGGAGGAAGGGGTCAAG
TATGAGCGTACCTTCATGGCATCGGAATTCCTGGACTGGCTGGTTCAGGAAGGTGAGGCCACTACGAGGAAAGAGGCAGA
GCAGCTTTGCCACCGGCTGATGGAGCATGGCATCATCCAGCATGTGTCCAACAAGCACCCATTTGTGGACAGCAATCTTC
TCTACCAGTTCAGAATGAACTTCCGGCGGAGGCGAAGACTAATGGAGCTGCTCAATGAAAAGTCCCCCTCCTCCCAGGAA
ACTCATGACAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCGGAAATCTACCAGCTTTATGTCAGTGAGCCCCAG
CAAGGAGATCAAGATCGTGTCTGCCGTGAGGAGGAGCAGCATGAGCAGCTGCGGCAGCAGCGGGTACTTCAGCAGCAGCC
CCACCCTCAGCAGCAGCCCCCCTGTGCTCTGCAACCCCAAGTCTGTGCTAAAGAGACCCGTCACGTCTGAGGAACTCCTT
ACTCCCGGGGCTCCGTATGCAAGGAAGACATTCACGATTGTTGGTGATGCAGTTGGCTGGGGTTTTGTGGTGCGAGGAAG
TAAGCCATGCCACATCCAGGCTGTCGACCCCAGTGGCCCTGCAGCCGCAGCAGGAATGAAGGTCTGTCAGTTTGTCGTCT
CTGTCAATGGGCTTAATGTCTTGCACGTAGACTACCGGACCGTGAGCAATCTGATCCTGACGGGCCCACGGACAATTGTC
ATGGAAGTCATGGAGGAGTTAGAGTGCTGA
ATGGAAGAGGGCAGCAGCGCTGGCAGCGCTGGCAGTGACAGCCGCACCAGCGGGAGCGGCGGGGCGCAGCAAAGAGAGCT
GGAGCGCATGGCTGAGGTCTTGGTCACCGGGGAGCAGCTACGGCTCAGGCTGCATGAAGAAAAGGTTATTAAAGATAGAC
GTCATCATCTCAAGACCTACCCAAACTGTTTTGTCGCAAAAGAACTGATTGACTGGCTGATTGAACACAAAGAGGCTTCC
GACAGAGAGACGGCAATTAAACTCATGCAGAAATTAGCAGACCGGGGCATTATTCACCATGTGTGTGATGAGCATAAGGA
ATTCAAGGATGTCAAACTCTTCTACCGCTTTAGAAAGGATGACGGCACCTTCCCATTGGATAACGAAGTGAAGGCCTTTA
TGAGAGGACAGAGGCTGTATGAAAAGCTGATGAGCCCTGAAAACACACTTCTCCAGCCCAGGGAGGAGGAAGGGGTCAAG
TATGAGCGTACCTTCATGGCATCGGAATTCCTGGACTGGCTGGTTCAGGAAGGTGAGGCCACTACGAGGAAAGAGGCAGA
GCAGCTTTGCCACCGGCTGATGGAGCATGGCATCATCCAGCATGTGTCCAACAAGCACCCATTTGTGGACAGCAATCTTC
TCTACCAGTTCAGAATGAACTTCCGGCGGAGGCGAAGACTAATGGAGCTGCTCAATGAAAAGTCCCCCTCCTCCCAGGAA
ACTCATGACAGTCCCTTCTGCCTGAGGAAGCAGAGCCATGACAATCGGAAATCTACCAGCTTTATGTCAGTGAGCCCCAG
CAAGGAGATCAAGATCGTGTCTGCCGTGAGGAGGAGCAGCATGAGCAGCTGCGGCAGCAGCGGGTACTTCAGCAGCAGCC
CCACCCTCAGCAGCAGCCCCCCTGTGCTCTGCAACCCCAAGTCTGTGCTAAAGAGACCCGTCACGTCTGAGGAACTCCTT
ACTCCCGGGGCTCCGTATGCAAGGAAGACATTCACGATTGTTGGTGATGCAGTTGGCTGGGGTTTTGTGGTGCGAGGAAG
TAAGCCATGCCACATCCAGGCTGTCGACCCCAGTGGCCCTGCAGCCGCAGCAGGAATGAAGGTCTGTCAGTTTGTCGTCT
CTGTCAATGGGCTTAATGTCTTGCACGTAGACTACCGGACCGTGAGCAATCTGATCCTGACGGGCCCACGGACAATTGTC
ATGGAAGTCATGGAGGAGTTAGAGTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .20 RPM |
| SRP051959_skeletal_muscle | 63 .37 RPM |
| SRP051959_lymph_node | 3 .26 RPM |
| SRP051959_lung | 17 .32 RPM |
| SRP051959_liver | 13 .82 RPM |
| SRP051959_kidney | 31 .11 RPM |
| SRP051959_heart | 2 .19 RPM |
| SRP051959_colon | 10 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000015660 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1898 | 88.29 | 99.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005497 retrocopies