Parental gene: | PSMD14, ENSCJAG00000005572 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:HGNC Symbol;Acc:16889] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:57515201..57625390(-) |
>ENSCJAG00000005572
GTGTTAAATTTGTTGTATAGGGGGAGGGGAACAGCTTCATTAGGTTGTGGCCAAGGGCCACCTACAGATGCTCCTGCAGT
GGACACAGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGTCGTGCTGGAGTTCCAATGG
AAGTTATGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCA
GGAACAGGTGTCAGTGTAGAGGCAGTTGATCCAGTGTTCCAAGCCAAAATGTTGGATATGTTGAAGCAAACAGGAAGGCC
GGAGATGGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGA
GCTTTGAAGCTTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGAT
GCCTTCAGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCAAATCTGGGTCACTTAAA
CAAGCCATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACCATTAACTATCGGAAAAATGAAC
TGGAACAGAAGATGTTGCTAAATTTACATAAGAAGAGTTGGATGGAAGGTTTGACACTGCAGGACTACAGTGAACATTGT
AAACATAATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGAT
GACACCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTA
TGACTTCAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTTGTATTTAAATAA
GTGTTAAATTTGTTGTATAGGGGGAGGGGAACAGCTTCATTAGGTTGTGGCCAAGGGCCACCTACAGATGCTCCTGCAGT
GGACACAGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGTCGTGCTGGAGTTCCAATGG
AAGTTATGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCA
GGAACAGGTGTCAGTGTAGAGGCAGTTGATCCAGTGTTCCAAGCCAAAATGTTGGATATGTTGAAGCAAACAGGAAGGCC
GGAGATGGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGA
GCTTTGAAGCTTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGAT
GCCTTCAGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCAAATCTGGGTCACTTAAA
CAAGCCATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACCATTAACTATCGGAAAAATGAAC
TGGAACAGAAGATGTTGCTAAATTTACATAAGAAGAGTTGGATGGAAGGTTTGACACTGCAGGACTACAGTGAACATTGT
AAACATAATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGAT
GACACCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTA
TGACTTCAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTTGTATTTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 19 .26 RPM |
| SRP051959_skeletal_muscle | 34 .94 RPM |
| SRP051959_lymph_node | 16 .57 RPM |
| SRP051959_lung | 14 .71 RPM |
| SRP051959_liver | 16 .92 RPM |
| SRP051959_kidney | 22 .79 RPM |
| SRP051959_heart | 18 .47 RPM |
| SRP051959_colon | 24 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002556 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015747 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026914 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004933 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012881 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012575 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004911 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014118 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1434 | 97.10 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005572 retrocopies