Parental gene:

PSMD14, ENSPPYG00000012881

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:HGNC Symbol;Acc:16889]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:51097867..51201761(+)


>ENSPPYG00000012881
ATGGACAGACTTCTTAGACTTGGAGGAGGTATGCCTGGACTGGGCCAGGGGCCACCTACAGATGCTCCTGCAGTGGACAC
AGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGCCGTGCTGGAGTTCCAATGGAAGTTA
TGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCAGGAACA
GGTGTCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATGTTGGATATGTTGAAGCAGACAGGAAGGCCGGAGAT
GGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTG
AAGCCTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGATGCCTTC
AGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCGAATCTGGGTCACTTAAACAAGCC
ATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACTATTAACTATCGGAAAAATGAACTGGAAC
AGAAGATGTTGCTAAATTTGCATAAGAAGAGTTGGATGGAAGGTTTAACACTTCAGGACTACAGTGAACATTGTAAACAC
AATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGATGACACC
TGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTATGACCT
CAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTCGTATTTAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .52 RPM
SRP007412_cerebellum 30 .40 RPM
SRP007412_heart 15 .32 RPM
SRP007412_kidney 26 .29 RPM
SRP007412_liver 23 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002556 ortholog_one2one 1 retrogene
retro_chof_2387,
Callithrix jacchus ENSCJAG00000005572 ortholog_one2one 1 retrogene
retro_cjac_1434,
Gorilla gorilla ENSGGOG00000015747 ortholog_one2one 1 retrogene
retro_ggor_1710,
Mus musculus ENSMUSG00000026914 ortholog_one2one 1 retrogene
retro_mmus_701,
Otolemur garnettii ENSOGAG00000004933 ortholog_one2one 2 retrogenes
retro_ogar_2955, retro_ogar_3213,
Pan troglodytes ENSPTRG00000012575 ortholog_one2one 1 retrogene
retro_ptro_1636,
Rattus norvegicus ENSRNOG00000004911 ortholog_one2one 1 retrogene
retro_rnor_1271,
Tupaia belangeri ENSTBEG00000014118 ortholog_one2one 1 retrogene
retro_tbel_3917,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2100 72.31 62.58
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Download FASTA sequences of all ENSPPYG00000012881 retrocopies