Parental gene:

CCDC167, ENSCJAG00000005622

Aliases:None
Description:coiled-coil domain containing 167 [Source:HGNC Symbol;Acc:21239]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:38493131..38516983(-)


>ENSCJAG00000005622
CTGAAGGCTCAGCAGCCCACCTCTCTTTGGCCTATGTTTCAGATCGATGGGCTAGAGAAGAAGCTGTCCCAGTGTCGGAG
AGACCTAGAGGCTGTGAATTCCAGGCTCCACAGCAGGGAGCTGAGCGCAGAGGCCAGAGAAGGAACTGAAGTTGCTTCGG
CAAGAGAACTGGAAGAACATGCTGCTCTCTCTGGCCATCTTCATCCTTCTGACACTTATCTATGCCTACTGGACCATGTG
AGCCTGGCACTTCCCCACAGCCAGCACAGGCTTCCACTTGGCCCCTTGGTCAGGGCCAAGCAGGCACTTCAAGCCTCAAC
AGGACCAAGGTGCTAG

Library Parental gene expression (RPM)
SRP051959_spleen 1 .18 RPM
SRP051959_skeletal_muscle 0 .31 RPM
SRP051959_lymph_node 1 .12 RPM
SRP051959_lung 0 .63 RPM
SRP051959_liver 0 .67 RPM
SRP051959_kidney 0 .51 RPM
SRP051959_heart 0 .60 RPM
SRP051959_colon 1 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012069 ortholog_one2many 2 retrogenes
retro_btau_30, retro_btau_517,
Canis familiaris ENSCAFG00000030835 ortholog_one2one 1 retrogene
retro_cfam_1854,
Felis catus ENSFCAG00000006745 ortholog_one2one 1 retrogene
retro_fcat_1558,
Mus musculus ENSMUSG00000024018 ortholog_one2one 1 retrogene
retro_mmus_3487,
Otolemur garnettii ENSOGAG00000000921 ortholog_one2one 1 retrogene
retro_ogar_880,
Pongo abelii ENSPPYG00000016563 ortholog_one2one 1 retrogene
retro_pabe_2092,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_960 87.63 98.97
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2. retro_cjac_3293 90.12 82.47
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Download FASTA sequences of all ENSCJAG00000005622 retrocopies