Parental gene: | ETF1, ENSCJAG00000006776 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:35393057..35428779(-) |
>ENSCJAG00000006776
ATGAAAAAGGATGTGCGTAATTGTACTGAAGGCCGAGTTCACAGCAATGGCACCAGCATGATATCCTTGATCATTCCTCC
CAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAGATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACC
GCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAAAGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTT
GTTTACTGTGGAACAATTGTAACAGAAGAAGGAAAGGAAAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAA
TACATCATTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGAT
TCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAGGAAACACAAGAGAAGTCCTGCACAAATTCACTGTG
GATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGCCTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTA
TGTTCGGAAAGTAGCAGAAACTGCTGTGCAGCTGTTTATTTCTGGGGACAAAGTGAATGTGGCTGGTCTAGTTTTAGCTG
GATCTGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTGATCAGAGGTTACAATCGAAAGTTTTAAAATTAGTT
GATATATCCTATGGTGGTGAAAATGGATTCAACCAAGCTATTGAGTTATCTACTGAAGTCCTCTCCAACGTGAAATTCAT
TCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAATCAGCCAGGACACGGGCAAATACTGTTTTGGCGTTGAAGATA
CACTAAAGGCTTTGGAAATGGGAGCTGTAGAAATTCTAATAGTCTATGAAAATCTGGATATAATGAGATATGTTCTTCAT
TGCCAAGGCACAGAAGAGGAGAAAATTCTCTATCTAACTCCAGAGCAAGAAAAGGATAAATCTCATTTCACAGACAAAGA
GACCGGACAGGAACATGAGCTTATTGAGAGCATGCCCCTGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTA
CGTTGGAAATTGTCACAGATAAATCACAAGAAGGGTCTCAGTTTGTGAAAGGCTTTGGTGGAATTGGAGGTATCTTGCGG
TACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGACGATGAATTTTTTGACCTTGATGACTACTAG
ATGAAAAAGGATGTGCGTAATTGTACTGAAGGCCGAGTTCACAGCAATGGCACCAGCATGATATCCTTGATCATTCCTCC
CAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAGATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACC
GCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAAAGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTT
GTTTACTGTGGAACAATTGTAACAGAAGAAGGAAAGGAAAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAA
TACATCATTGTATTTGTGTGACAACAAATTCCATACAGAGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGAT
TCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACACTCCAAGGAAACACAAGAGAAGTCCTGCACAAATTCACTGTG
GATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGCCTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTA
TGTTCGGAAAGTAGCAGAAACTGCTGTGCAGCTGTTTATTTCTGGGGACAAAGTGAATGTGGCTGGTCTAGTTTTAGCTG
GATCTGCTGACTTTAAAACTGAACTAAGTCAATCTGATATGTTTGATCAGAGGTTACAATCGAAAGTTTTAAAATTAGTT
GATATATCCTATGGTGGTGAAAATGGATTCAACCAAGCTATTGAGTTATCTACTGAAGTCCTCTCCAACGTGAAATTCAT
TCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAATCAGCCAGGACACGGGCAAATACTGTTTTGGCGTTGAAGATA
CACTAAAGGCTTTGGAAATGGGAGCTGTAGAAATTCTAATAGTCTATGAAAATCTGGATATAATGAGATATGTTCTTCAT
TGCCAAGGCACAGAAGAGGAGAAAATTCTCTATCTAACTCCAGAGCAAGAAAAGGATAAATCTCATTTCACAGACAAAGA
GACCGGACAGGAACATGAGCTTATTGAGAGCATGCCCCTGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTA
CGTTGGAAATTGTCACAGATAAATCACAAGAAGGGTCTCAGTTTGTGAAAGGCTTTGGTGGAATTGGAGGTATCTTGCGG
TACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGGAGACGATGAATTTTTTGACCTTGATGACTACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 64 .08 RPM |
| SRP051959_skeletal_muscle | 92 .35 RPM |
| SRP051959_lymph_node | 42 .42 RPM |
| SRP051959_lung | 58 .03 RPM |
| SRP051959_liver | 66 .71 RPM |
| SRP051959_kidney | 74 .10 RPM |
| SRP051959_heart | 47 .31 RPM |
| SRP051959_colon | 60 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001282 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010830 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000013041 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007362 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000657 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000005871 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000009338 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006650 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019450 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2316 | 87.39 | 58.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4133 | 93.14 | 96.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000006776 retrocopies