Parental gene:

PQLC3, ENSCJAG00000006801

Aliases:None
Description:PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:28503]
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:97409063..97428246(-)


>ENSCJAG00000006801
GCGCGGGGCCTCAGCCTCCCGAGTTTACTTCTGGAGCTGGCGGGGTTCCTGGTGTTTCTCCGATACCAGTGTTACTATGG
GTATCCGCCACTGACCTACCTGGAGTACCCCATCCTCATCGCACAAGATGTCATCCTCCTGTTCTGTATCTTTCATTTTA
ACGGGAACGTGAAGCAGGCCATGCCCTACCACTTGGTAAGACTGGCATCTTCTTGGTTCGTCCTCGCCCTGCAGAAGTGG
ATCATAGACCTGGCCATGAATTTCTGTACTTTCATCAGCGCGGCCAGTAAGTTTACGCAGCTCCAGTGTCTGTGGAAGAC
GAGAGACTCGGGAGCGGTGAGTGCGCTGACTTGGAGCCTCTCCGCCTACACCTGCGCAACAAGAATAATCACAACCTTCA
TGACCACCAACGATTTTACAATTCTAACACGTTTTGTGATCATGCTGGCTTTAAATATATGGGTAACAGTGACAGTACTT
CGCTACCGGAAGACCGCCATGAAGGCTGAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .22 RPM
SRP051959_skeletal_muscle 1 .77 RPM
SRP051959_lymph_node 4 .57 RPM
SRP051959_lung 5 .03 RPM
SRP051959_liver 3 .44 RPM
SRP051959_kidney 3 .44 RPM
SRP051959_heart 4 .16 RPM
SRP051959_colon 3 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006017 ortholog_one2one 3 retrogenes
retro_chof_1902, retro_chof_2195, retro_chof_717,
Dasypus novemcinctus ENSDNOG00000015960 ortholog_one2one 1 retrogene
retro_dnov_2157,
Macropus eugenii ENSMEUG00000009376 ortholog_one2one 1 retrogene
retro_meug_1167,
Mus musculus ENSMUSG00000045679 ortholog_one2one 2 retrogenes
retro_mmus_1352, retro_mmus_2875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3969 90.70 75.29
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Download FASTA sequences of all ENSCJAG00000006801 retrocopies