Parental gene:

PQLC3, ENSDNOG00000015960

Aliases:None
Description:PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:28503]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4910:20120..104386(+)


>ENSDNOG00000015960
ATGGGCCCGGGGCTGCTGTGGTTCTGCCACTGGAGCACCCTGGGCGTGTGCGCCGCGCTCAAGCTGCCGCAGATCTCGGC
TCTGCTGGCGGCGCGCGGCGCGCGGGGCCTCAGCGTCCCGAGTTTGCTTCTGGAGCTGACGGAGTTCCTGGTGTTCCTCC
GGTACCAGTGCTACTATGGCTACCCACTGCTGACCTACCTGGAGTATCCCATCATCATCGCTCAAGATATCATCCTCTTA
CTCTGCATCTTCCATTTTAAGGGGAACGTGAAACAGGCTGCACCGTACTTCGCTGTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATCTACTTTCATTAGCGCGGCCAGTAAATTTGCACAACTCC
AGTATCTGTGGAAGACAAAGGACTCAGGAGCAGTGAGTGCTCTAACTTGGAGCCTCTCTTCATACACCTGTGCAACAAGA
ATAGTAACAACCTTAATGACCACCAATGATCTTACAATTCTTATCCGTTTTGTGATCATGCTGGCTTTGAACATATGGGT
AACAGCTACAATACTTCACTACCGGAAGATGAACACCGTGAAGACTGAATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 30 .34 RPM
SRP012922_cerebellum 77 .12 RPM
SRP012922_heart 12 .99 RPM
SRP012922_kidney 151 .41 RPM
SRP012922_liver 9 .91 RPM
SRP012922_lung 53 .15 RPM
SRP012922_quadricep_muscle 6 .23 RPM
SRP012922_spleen 72 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006017 ortholog_one2one 3 retrogenes
retro_chof_1902, retro_chof_2195, retro_chof_717,
Callithrix jacchus ENSCJAG00000006801 ortholog_one2one 1 retrogene
retro_cjac_3969,
Macropus eugenii ENSMEUG00000009376 ortholog_one2one 1 retrogene
retro_meug_1167,
Mus musculus ENSMUSG00000045679 ortholog_one2one 2 retrogenes
retro_mmus_1352, retro_mmus_2875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2157 81.77 100.00
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Download FASTA sequences of all ENSDNOG00000015960 retrocopies