Parental gene:

EIF3I, ENSCJAG00000006810

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:66445606..66461971(+)


>ENSCJAG00000006810
ATGAAGCCGATCCTGCTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACCTTCTCTTTAC
TGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGTTGGGCACCTACATGGGCCATACTGGAG
CTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGAC
TGCGAAACAGGAAAGCAGCTGGCCCTCCTCAAGACCAATTCGGCTGTCCGGACCTGCGGTTTTGACTTTGGCGGCAACAT
CATCATGTTCTCCACGGACAAGCAGATGGGCTACCAGTGCTTTGTGAGCTTCTTTGACCTTCGGGATCCGAGCCAGATTG
ACAACAATGAGCCCTACATGAAGATCCCTTGCAATGACTCTAAAATCACCAGTGCCGTTTGGGGACCCCTGGGAGAGTGC
ATCATCGCTGGCCATGAGAGTGGAGAGCTCAACCAGTACAGTGCCAAGTCTGGAGAGGTATTGGTGAATGTTAAGGAGCA
CTCACGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACTGCATCCAAGGACAACACAGCCAAGC
TTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCCAAC
TATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC
CAGGTTCTTCCATTTGGCCTTTGAAGAAGAATTTGGAAGAGTCAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCC
ATCCTGATGGCAAGAGCTACAGCAGCGGTGGTGAAGATGGTTATGTCCGTATCCACTACTTCGACCCACAATATTTCGAA
TTTGAGTTTGAGGCTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 30 .36 RPM
SRP051959_skeletal_muscle 54 .14 RPM
SRP051959_lymph_node 26 .46 RPM
SRP051959_lung 23 .28 RPM
SRP051959_liver 34 .22 RPM
SRP051959_kidney 33 .10 RPM
SRP051959_heart 29 .17 RPM
SRP051959_colon 24 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010674 ortholog_one2one 1 retrogene
retro_cfam_321,
Callithrix jacchus ENSCJAG00000021593 within_species_paralog 1 retrogene
retro_cjac_2503,
Echinops telfairi ENSETEG00000008047 ortholog_one2many 1 retrogene
retro_etel_1497,
Homo sapiens ENSG00000084623 ortholog_one2one 2 retrogenes
retro_hsap_3888, retro_hsap_3894,
Gorilla gorilla ENSGGOG00000001579 ortholog_one2one 3 retrogenes
retro_ggor_2540, retro_ggor_2615, retro_ggor_2623,
Loxodonta africana ENSLAFG00000017026 ortholog_one2many 1 retrogene
retro_lafr_1073,
Macaca mulatta ENSMMUG00000006119 ortholog_one2one 2 retrogenes
retro_mmul_1730, retro_mmul_1733,
Monodelphis domestica ENSMODG00000017481 ortholog_one2many 2 retrogenes
retro_mdom_1054, retro_mdom_822,
Mus musculus ENSMUSG00000028798 possible_ortholog 2 retrogenes
retro_mmus_1375, retro_mmus_607,
Nomascus leucogenys ENSNLEG00000002426 ortholog_one2one 2 retrogenes
retro_nleu_1129, retro_nleu_1135,
Pongo abelii ENSPPYG00000001598 ortholog_one2one 2 retrogenes
retro_pabe_3169, retro_pabe_3175,
Rattus norvegicus ENSRNOG00000047185 possible_ortholog 1 retrogene
retro_rnor_1548,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3104 62.86 74.46
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Download FASTA sequences of all ENSCJAG00000006810 retrocopies