Parental gene:

Eif3i, ENSMUSG00000028798

Aliases:Eif3i, 36kDa, D4Ertd632e, Eif3s2, Trip1
Description:eukaryotic translation initiation factor 3, subunit I [Source:MGI Symbol;Acc:MGI:1860763]
Organism:Mouse (Mus musculus)
Coordinates:4:129591959..129600648(-)


>ENSMUSG00000028798
ATGAAACCCATCCTGCTGCAGGGCCATGAGCGGTCCATCACGCAGATCAAGTATAACCGCGAAGGAGACCTTCTCTTCAC
CGTGGCCAAAGACCCTATCGTCAACGTGTGGTACTCTGTCAATGGGGAGAGGCTAGGCACCTACATGGGCCACACTGGAG
CTGTGTGGTGCGTGGATGCTGACTGGGACACCAAGCATGTCCTTACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGAC
TGTGAAACAGGGAAGCAGCTGGCCCTACTCAAGACCAACTCAGCTGTCCGGACCTGCGGCTTTGACTTTGGGGGCAACAT
CATCATGTTCTCCACAGACAAGCAGATGGGGTATCAGTGCTTCGTGAGCTTCTTTGATCTGCGGGATCCAAGCCAGATCG
ACAGCAACGAGCCCTACATGAAGATCCCCTGTAATGATTCCAAGATCACCAGTGCCGTCTGGGGCCCCCTCGGGGAGTGC
GTCATCGCAGGCCACGAGAGCGGAGAGCTCAACCAGTATAGCGCCAAGTCTGGAGAGGTGTTGGTGAACGTAAAGGAACA
CTCTCGGCAGATCAATGACATCCAGTTGTCTAGAGACATGACCATGTTTGTCACTGCATCTAAGGACAACACAGCTAAGC
TCTTCGACTCCACGACTCTTGAACATCAGAAGACTTTCCGAACAGAGCGTCCTGTCAACTCGGCTGCTCTCTCTCCCAAC
TATGACCATGTGGTGCTGGGAGGAGGTCAGGAAGCCATGGATGTGACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC
CAGGTTCTTCCATTTGGCTTTTGAGGAAGAGTTTGGAAGAGTCAAGGGCCACTTTGGACCGATCAACAGCGTTGCCTTCC
ATCCTGATGGCAAGAGCTACAGCAGCGGTGGCGAAGATGGTTACGTCCGCATCCACTACTTCGACCCACAGTACTTTGAG
TTCGAGTTTGAGGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 65 .53 RPM
SRP007412_cerebellum 62 .83 RPM
SRP007412_heart 60 .95 RPM
SRP007412_kidney 76 .29 RPM
SRP007412_liver 63 .57 RPM
SRP007412_testis 60 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006810 possible_ortholog 1 retrogene
retro_cjac_3104,
Echinops telfairi ENSETEG00000008047 ortholog_one2one 1 retrogene
retro_etel_1497,
Loxodonta africana ENSLAFG00000017026 ortholog_one2one 1 retrogene
retro_lafr_1073,
Monodelphis domestica ENSMODG00000017481 ortholog_one2one 2 retrogenes
retro_mdom_1054, retro_mdom_822,
Mus musculus ENSMUSG00000030224 within_species_paralog 1 retrogene
retro_mmus_794,
Rattus norvegicus ENSRNOG00000047185 ortholog_one2one 1 retrogene
retro_rnor_1548,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_607 84.86 96.31
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2. retro_mmus_1375 64.53 80.31
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Download FASTA sequences of all ENSMUSG00000028798 retrocopies