Parental gene:

ENSCJAG00000007120

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:18825520..18829868(+)


>ENSCJAG00000007120
ATGGCCGCGCCCAGTGGTGGATTCAAGCCTCGTGAGCGAAGCTGTGGGGAGCAGTTGGAGGACTGGGATGCTGTGGCCCC
CAAGCGGCCCCGAGTCGGGGCAGGAAACAAGATCGGAGGCCGTAGGCTTATTGTGGTGCTGGAAGGGGCCAGTCTGGAGA
CAGTCAAGGTAGGGAAGACGTATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAAAATGGACGGGACCCC
GGGGAAGTGCGGCCAGACATAGCCCACCAGAGCTTGCTAATGCTGATGGATAGTCCCCTGAACCGAGCTGGCTTGCTGCA
GGTTTATATCCACACACAGAAGAATGTTCTGATTGAAGTGAACCCCCAGACCCGAATTCCTAGAACCTTTGACCGCTTTT
GTGGCCTCATGGTTCAGCTTTTACACAAGCTCAGTGTTCGAGCCGCTGATGGCCCCCAGAAGCTTTTGAAGGTAATTAAG
AATCCAGTATCAGATCACTTTCCAGTTGGATGTATGAAAGTTGGCACTTCTTTTTCCATCCCGGTTGTCAGTGATCTGCG
TGAGCTAGTGCCCAGCAGTGATCCTATTGTTTTTGTGGTGGGGGCCTTTGCCCATGGTAAGGTCAGTGTGGAGTATACAG
AGAAGATGGTGTCCATCAGCAACTATCCTCTTTCTGCTGCCCTCACCTGTGCAAAACTTACCACAGCCTTTGAGGAAGTA
TGGGGGGTCATTTGA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .10 RPM
SRP051959_skeletal_muscle 10 .05 RPM
SRP051959_lymph_node 8 .49 RPM
SRP051959_lung 6 .73 RPM
SRP051959_liver 7 .19 RPM
SRP051959_kidney 8 .03 RPM
SRP051959_heart 7 .45 RPM
SRP051959_colon 5 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013753 ortholog_one2one 1 retrogene
retro_amel_1924,
Gorilla gorilla ENSGGOG00000004287 ortholog_one2one 1 retrogene
retro_ggor_3077,
Macropus eugenii ENSMEUG00000000831 ortholog_one2one 1 retrogene
retro_meug_1299,
Myotis lucifugus ENSMLUG00000009196 ortholog_one2one 1 retrogene
retro_mluc_737,
Macaca mulatta ENSMMUG00000010207 ortholog_one2one 1 retrogene
retro_mmul_671,
Nomascus leucogenys ENSNLEG00000005080 ortholog_one2one 1 retrogene
retro_nleu_501,
Otolemur garnettii ENSOGAG00000006975 ortholog_one2one 2 retrogenes
retro_ogar_2971, retro_ogar_945,
Pongo abelii ENSPPYG00000004215 ortholog_one2one 1 retrogene
retro_pabe_2924,
Rattus norvegicus ENSRNOG00000012828 ortholog_one2one 1 retrogene
retro_rnor_1459,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2960 86.61 51.64
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Download FASTA sequences of all ENSCJAG00000007120 retrocopies