Parental gene:

ENSPPYG00000004215

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:12:7206930..7211821(+)


>ENSPPYG00000004215
ATGGCCGCGCCCAGTGGTGGATTCAAGCCTCGTGAACGAAGCGGTGGGGAGCAGGCACAGGACTGGGATGCTGTGCCACC
CAAGCGGCCCCGACTAGGGGCAGGAAACAAGATCGGAGGCCGTAGGCTTATTGTGGTGCTGGAAGGGGCCAGTCTGGAGA
CAGTCAAGGTAGGGAAGACATATGAGCTACTCAACTGTGACAAGCACAAGTCTATATTGTTGAAGAATGGACGGGACCCT
GGGGAAGTGCGGCCAGACATCACCCACCAGAGTTTGCTGATGCTGATGGATAGTCCCCTGAACCGAGCTGGCTTGCTACA
GGTTTATATCCATACCCAGAAGAATGTTCTGATTGAAGTGAATCCCCAGACCCGAATTCCCAGAACCTTTGACCGCTTTT
GTGGCCTCATGGTTCAACTTTTACACAAGCTCAGTGTTCGAGCAGCTGATGGCCCCCAGAAGCTTTTGAAGGTAATTAAG
AATCCAGTATCAGATCACTTTCCAGTTGGATGTATGAAAGTTGGCACTTCTTTTTCCATCCCGGTTGTCAGTGATGTGCG
TGAGCTGGTGCCCAGCAGTGATCCTATTGTTTTTGTGGTAGGGGCCTTTGCCCATGGCAAGGTCAGTGTGGAGTATACAG
AGAAGATGGTGTCCATCAGCAACTATCCCCTTTCTGCTGCCCTCACCTGTGCAAAACTTACCACAGCCTTTGAGGAAGTA
TGGGGGGTCATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .92 RPM
SRP007412_cerebellum 10 .82 RPM
SRP007412_heart 14 .39 RPM
SRP007412_kidney 23 .04 RPM
SRP007412_liver 18 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013753 ortholog_one2one 1 retrogene
retro_amel_1924,
Callithrix jacchus ENSCJAG00000007120 ortholog_one2one 1 retrogene
retro_cjac_2960,
Gorilla gorilla ENSGGOG00000004287 ortholog_one2one 1 retrogene
retro_ggor_3077,
Macropus eugenii ENSMEUG00000000831 ortholog_one2one 1 retrogene
retro_meug_1299,
Myotis lucifugus ENSMLUG00000009196 ortholog_one2one 1 retrogene
retro_mluc_737,
Macaca mulatta ENSMMUG00000010207 ortholog_one2one 1 retrogene
retro_mmul_671,
Nomascus leucogenys ENSNLEG00000005080 ortholog_one2one 1 retrogene
retro_nleu_501,
Otolemur garnettii ENSOGAG00000006975 ortholog_one2one 2 retrogenes
retro_ogar_2971, retro_ogar_945,
Rattus norvegicus ENSRNOG00000012828 ortholog_one2one 1 retrogene
retro_rnor_1459,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2924 70.24 68.44
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Download FASTA sequences of all ENSPPYG00000004215 retrocopies