Parental gene:

PIAS2, ENSCJAG00000008117

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:13:84581404..84702164(-)


>ENSCJAG00000008117
CTGTGTATATTAGAGCATAATCAGAATATGGTTTCTAGTTTTAGGGTTTCTGAACTACAAGTATTACTAGGCTTTGCTGG
ACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTGCATTTATTGAAGAGTGGCTGCAGCCCTGCGGTTC
AGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACGAACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCA
TCGGTTTTCAGTTTGGATGGTAGCTCATCACCTGTAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCAC
TTCAGTTACACCTCACTCACCATCCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGC
AGCCATCTCCCCCAATTCCTCCTGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTC
ATCAAGCCCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTCGCTTTGACACCTCAGCA
AGTTAGAGAGATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTACAAGTTCAGTTGAGACTTT
GCCTGGCAGAAACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTCCT
TTGCCTGGCTACGCACCACCACCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACATCTTTAGT
TAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTACTCCATGTCTGTGT
ATCTTGTACGACAGCTTACATCAGCCATGTTGTTACAGAGATTAAAAATGAAAGGTATTAGAAACCCTGATCATTCCAGA
GCACTAATAAAGGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTTGATGTGCCC
TTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTACACATCTGCAGTGTTTTGATGCTGCCCTTTATT
TACAAATGAATGAGAAGAAGCCCACCTGGATTTGTCCTGTATGTGACAAAAAAGCTGCCTATGAAAGTTTAATATTAGAT
GGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTGGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAAT
GAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAACTGTGCACAAAAATAGAAAGTTCAAGTGTCCTCAGTAAGCCTT
GTTCAGTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGATGAA
GAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTA
TCAGCCATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAG
TACCATTCCACCACACGCCAATATCAAGCATGTCATCAGATTTGCCAGGTTTGGATTTTCTTTCCCTTATTCCAGTTGAT
CCCCAGCAGTACTGTCCTCCTATGTTTTTGGATAGTCTCACCTCACCCTTAACAGCAAGCAGTACGTCTGTCACCACCAC
CAGCTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAGCAGCAGGAGTGAGACAGGGGTCATAACCAGCAGTGGAAGTA
ACATTCCTGACATCATCTCATTGGACTAA

Library Parental gene expression (RPM)
SRP051959_spleen 27 .67 RPM
SRP051959_skeletal_muscle 27 .14 RPM
SRP051959_lymph_node 22 .49 RPM
SRP051959_lung 24 .37 RPM
SRP051959_liver 16 .44 RPM
SRP051959_kidney 28 .38 RPM
SRP051959_heart 36 .64 RPM
SRP051959_colon 14 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005911 ortholog_one2one 1 retrogene
retro_chof_549,
Gallus gallus ENSGALG00000001843 ortholog_one2one 1 retrogene
retro_ggal_24,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4167 88.42 90.03
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Download FASTA sequences of all ENSCJAG00000008117 retrocopies