Parental gene: | NECAP2, ENSCJAG00000008146 |
| Aliases: | None |
| Description: | NECAP endocytosis associated 2 [Source:HGNC Symbol;Acc:25528] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:50746711..50765601(+) |
>ENSCJAG00000008146
ATGGAGGAGAGCGGGTACGAGTCGGTGCTGTGTGTCAAGCCTGACGTCCACGTCTACCGCATCCCTCCGCGGGCTACCAA
CCGTGGCTACAGGGCCGCGGAGTGGCAGCTGGACCAGCCGTCATGGAGTGGCCGGCTGAGGATCACTGCAAAGGGGCAGA
TGGCCTACATCAAGCTGGAGGACAGGACCTCAGGGGAGCTCTTTGCTCAGGCCCCAGTGGATCAGTTTCCTGGCACAGCT
GTGGAGAGCGTGACGGATTCCAGCAGGTACTTCGTAATCCGCATTGAAGATGGAAACGGGCGACGGGCGTTTATTGGAAT
TGGCTTCGGGGACCGAGGTGATGCCTTTGACTTCAATGTTGCATTGCAGGATCATTTCAAGTGGGTGAAACAGCAGTGCG
AATTTGCAAAACAAGCCCAGAACCCAGACCAAAGCCCTAAATTGGACCTGGGCTTCAAGGAGGGCCAGACCATCAAGCTC
AACATCGCAAACATGAAGAAGAAGGAAGGAGCAGCCGGGAATCCCCGAGCCCGTCCTGCCAGCACAGGAGGGTTGAGCTT
GCTTCCCCCTCCCCCAGGGGGCAGAACCTCCACCCTCATCCCTCCCCCTGGGGAGCAGTTGTCGGTGGGGGGATCCCTCG
TCCAGCCAGCAGTTGCTCCCACTTCAGATCAACTTCCAGCCAGACCCAACCAGGCTGGGTTCAGTTCTGACCTGAGCACA
ATTTTTCCTCATGTGACTTCTGGGAAGGAGCTCCCTCATCTGGGCCAAAGGAAGGAGGGCGAAGCATTCCTCAGCTGGCC
TGTGTTTGGAACATGA
ATGGAGGAGAGCGGGTACGAGTCGGTGCTGTGTGTCAAGCCTGACGTCCACGTCTACCGCATCCCTCCGCGGGCTACCAA
CCGTGGCTACAGGGCCGCGGAGTGGCAGCTGGACCAGCCGTCATGGAGTGGCCGGCTGAGGATCACTGCAAAGGGGCAGA
TGGCCTACATCAAGCTGGAGGACAGGACCTCAGGGGAGCTCTTTGCTCAGGCCCCAGTGGATCAGTTTCCTGGCACAGCT
GTGGAGAGCGTGACGGATTCCAGCAGGTACTTCGTAATCCGCATTGAAGATGGAAACGGGCGACGGGCGTTTATTGGAAT
TGGCTTCGGGGACCGAGGTGATGCCTTTGACTTCAATGTTGCATTGCAGGATCATTTCAAGTGGGTGAAACAGCAGTGCG
AATTTGCAAAACAAGCCCAGAACCCAGACCAAAGCCCTAAATTGGACCTGGGCTTCAAGGAGGGCCAGACCATCAAGCTC
AACATCGCAAACATGAAGAAGAAGGAAGGAGCAGCCGGGAATCCCCGAGCCCGTCCTGCCAGCACAGGAGGGTTGAGCTT
GCTTCCCCCTCCCCCAGGGGGCAGAACCTCCACCCTCATCCCTCCCCCTGGGGAGCAGTTGTCGGTGGGGGGATCCCTCG
TCCAGCCAGCAGTTGCTCCCACTTCAGATCAACTTCCAGCCAGACCCAACCAGGCTGGGTTCAGTTCTGACCTGAGCACA
ATTTTTCCTCATGTGACTTCTGGGAAGGAGCTCCCTCATCTGGGCCAAAGGAAGGAGGGCGAAGCATTCCTCAGCTGGCC
TGTGTTTGGAACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 34 .52 RPM |
| SRP051959_skeletal_muscle | 4 .04 RPM |
| SRP051959_lymph_node | 32 .94 RPM |
| SRP051959_lung | 19 .07 RPM |
| SRP051959_liver | 9 .68 RPM |
| SRP051959_kidney | 15 .51 RPM |
| SRP051959_heart | 8 .61 RPM |
| SRP051959_colon | 12 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015895 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006140 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1447 | 90.94 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2449 | 81.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008146 retrocopies