Parental gene:

RBM23, ENSCJAG00000008482

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:46932840..46978939(-)


>ENSCJAG00000008482
ATGGCATCTGATGACTTTGATATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATGAGCAACAAAG
GAAAGAAGTCAAAAAGGATTATCCTAGCAATACCACCAGCAGCACCAGCAACAGTGGCAGTGGGACCAATGGAAGCAGCA
CCATCAAGGAGACAAGCAAGAAGAAGAGGAGTCGGAGCCATAGTAGAAGCAGGGATAGAAAGCGCAGTCGTAGTCGAGAC
CGGGATCAGCATAGACGGAGAAACAGTCAGAGTCGAAGTCGAGATCGGCAGCATCATCACCGTAGCCGTAGCTGGGATCA
TCGACATAGTGAGCCACGAAGTCGGGACCATCGTCGTGAGGATTGTGTGCACTACAGGAGTCCTCCACTTGCCACAGGCC
ATAGGTATGGACATAGTAAGAGTCCTCATTTCAGAGAGAAGAGCCCAGTCAGGGAGCCAATTGATAATCTGAGTCCTGAG
GAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCTGCCCGCATTAGGCCTCGAGACCTGGAGGACTTTTTCTCTGC
TGTAGGCAAGGTTCGTGATGTACGTATCATCTCAGATCGGAACTCACGCCGTTCTAAGGGCATCGCTTATGTGGAATTCT
GTGAAATCCAGTCTGTGCCACTGGCCATTGGGCTAACTGGGCAACGGTTGCTGGGAGTGCCTATCATTGTACAGGCTTCA
CAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCACTGGTGGACCAATGCGCCTCTATGTGGG
TTCCCTGCACTTCAATATCACTGAAGACATGCTTCGAGGCATCTTTGAGCCCTTTGGCAAAATTGATAATATTGTCCTGA
TGAAGGATTCAGATACAGGCCGCTCTAAAGGTTATGGTTTCATCACGTTCTCTGACTCTGAGTGTGCCCGGCGGGCCATG
GATCAGTTGAATGGCTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACTGAGCAACTGGATGGTGGCACAGA
CATCACTTTCCCTGATGGGGACCAGGAGCTGGATCTGGGATCAGCAGGTGGATGTTTGCAGCTTATGGCCAAACTGGCAG
AAGGCTCTGGAATACAACTGCCAAGTACCACTGCTACTGCTGCTGCTGCTGCCGCCGCCCAAGCTGCTGCCTTGCAACTG
AATGGAGCAGTTCCCTTGGGCGCCCTGAACCCAGCAGTTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGCCTCCCAGTG
CTTCCAGCTCTCCAGCCTCTTTACCCCCCAGACCATGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 24 .31 RPM
SRP051959_skeletal_muscle 15 .07 RPM
SRP051959_lymph_node 25 .59 RPM
SRP051959_lung 24 .16 RPM
SRP051959_liver 15 .40 RPM
SRP051959_kidney 25 .09 RPM
SRP051959_heart 18 .33 RPM
SRP051959_colon 20 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017535 within_species_paralog 1 retrogene
retro_cjac_2199,
Myotis lucifugus ENSMLUG00000012923 ortholog_one2one 1 retrogene
retro_mluc_2430,
Ochotona princeps ENSOPRG00000001092 ortholog_one2one 2 retrogenes
retro_opri_126, retro_opri_412,
Pan troglodytes ENSPTRG00000006151 ortholog_one2one 1 retrogene
retro_ptro_3108,
Ictidomys tridecemlineatus ENSSTOG00000010354 ortholog_one2one 1 retrogene
retro_itri_1902,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1069 84.08 64.50
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Download FASTA sequences of all ENSCJAG00000008482 retrocopies