Parental gene: | PHF11, ENSCJAG00000008839 |
| Aliases: | None |
| Description: | PHD finger protein 11 [Source:HGNC Symbol;Acc:17024] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:65305579..65337749(-) |
>ENSCJAG00000008839
ATGGCCCAGGCGTCACCACCTCTGCCGGAGTCAATGCACAGCACTGGCAGCTGGGAGGCCCAGCCGGAGCAGGAGGCGCT
CCTCCTTCCCACCGGTGTCTTTCAGGTTGCAGAAAAGATGGAAAAAAGGACATGTGCCCTCTGCCCCAAAGATGTCGAGT
ATAATATCCTGTACTTTGCACAATCAGAGAATATAGCTGCCCATGAAAATTGTTTGCTGTATTCTTCAGGACTTGTGGAA
TGTGAGGATCATGATCCACTTAATCTTGATAGAAATTTTGATGTGGAATCGGTAAAGAAAGAAATCCAGAGAGGAAGGAA
GCTCAAATGCACATTTTGTCGTAAAAGAGGAGCCACCGTGGGATGTGATTTAAAAGCCTGTAACAAGAATTACCACTTTT
TCTGTGCCAAGAAGGACCATGCAGTTCCAAAGTCTGATGGAGCTCGAGGAATTTATAAACTGTTTTGCCAACAACATGCT
CAATTCCCGATCATCACTCAAAGTGCTAAATTTTCAGGAGTTAAAGGAAAAAGAGGAAGGAAGAAACACTTCACAGTCAA
TCACATACAGCCACCCGAAACAATGACACATAATAGATTCGTAAGACACGTGAAAGAAGAGCATGGCAAACGCACAGGTA
ATTTTTTAAAAATCCTCTTTGTTGCTAATGCAAGGAAGCAAGACTTTCTTACCATAATTACTGAAGAAATTTTGGCCAAG
GTCCATTCAATTCCCAGAAAACTCATGGATGAGACTACTTCAGAAGCAGACTATGAAGAAATCGGGAGTGCACTTTTTGA
ATGCAGATTGTTCGAAGACACATTTGAAAATTTTCAAGCAGCAATAGAGAAAAAAATTGACACATCTCAACAAAGGCGGC
AGCAGTTGAAGGAAGAGATTGAGCTACTTCATGACTTAAAACAAACCTTGTGCTCTCTTCAAGAAAGTAGAGAGCCTATG
TCAAGTTCTACATCAATATCGTCCCTGTCGTCTTAG
ATGGCCCAGGCGTCACCACCTCTGCCGGAGTCAATGCACAGCACTGGCAGCTGGGAGGCCCAGCCGGAGCAGGAGGCGCT
CCTCCTTCCCACCGGTGTCTTTCAGGTTGCAGAAAAGATGGAAAAAAGGACATGTGCCCTCTGCCCCAAAGATGTCGAGT
ATAATATCCTGTACTTTGCACAATCAGAGAATATAGCTGCCCATGAAAATTGTTTGCTGTATTCTTCAGGACTTGTGGAA
TGTGAGGATCATGATCCACTTAATCTTGATAGAAATTTTGATGTGGAATCGGTAAAGAAAGAAATCCAGAGAGGAAGGAA
GCTCAAATGCACATTTTGTCGTAAAAGAGGAGCCACCGTGGGATGTGATTTAAAAGCCTGTAACAAGAATTACCACTTTT
TCTGTGCCAAGAAGGACCATGCAGTTCCAAAGTCTGATGGAGCTCGAGGAATTTATAAACTGTTTTGCCAACAACATGCT
CAATTCCCGATCATCACTCAAAGTGCTAAATTTTCAGGAGTTAAAGGAAAAAGAGGAAGGAAGAAACACTTCACAGTCAA
TCACATACAGCCACCCGAAACAATGACACATAATAGATTCGTAAGACACGTGAAAGAAGAGCATGGCAAACGCACAGGTA
ATTTTTTAAAAATCCTCTTTGTTGCTAATGCAAGGAAGCAAGACTTTCTTACCATAATTACTGAAGAAATTTTGGCCAAG
GTCCATTCAATTCCCAGAAAACTCATGGATGAGACTACTTCAGAAGCAGACTATGAAGAAATCGGGAGTGCACTTTTTGA
ATGCAGATTGTTCGAAGACACATTTGAAAATTTTCAAGCAGCAATAGAGAAAAAAATTGACACATCTCAACAAAGGCGGC
AGCAGTTGAAGGAAGAGATTGAGCTACTTCATGACTTAAAACAAACCTTGTGCTCTCTTCAAGAAAGTAGAGAGCCTATG
TCAAGTTCTACATCAATATCGTCCCTGTCGTCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .69 RPM |
| SRP051959_skeletal_muscle | 4 .91 RPM |
| SRP051959_lymph_node | 15 .25 RPM |
| SRP051959_lung | 14 .71 RPM |
| SRP051959_liver | 6 .71 RPM |
| SRP051959_kidney | 11 .58 RPM |
| SRP051959_heart | 7 .10 RPM |
| SRP051959_colon | 6 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004238 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2944 | 95.20 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008839 retrocopies