Parental gene:

JTB, ENSCJAG00000009973

Aliases:None
Description:jumping translocation breakpoint [Source:HGNC Symbol;Acc:6201]
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:7927875..7932416(-)


>ENSCJAG00000009973
ATGCCTGCGGGCGCGGGGAGGCATGGCCTCCCCCAGGGCCGCCGCCTCTGCTGGTTGCTCTGTGCTTTCACCTTAAAGCT
CTGCCAAGCAGAGGCTCCAGTGCTGGAGGAGAAGCTGTCAGCAGTGAGCACCTCAAATTTGCCATGCTGGCTGGTGGGAG
AGTTTGTGGTGTCAGAAGAGTGCTCTCCATGCTCTAGTTTCCAGGCTAAAACCACCCCCGAGTGTGGTCCCACAGGGTAC
GTGGAGAAAATCACATGCAGCTCATCTAAGAGAAATGAGTTCAAAAGCTGCCGCTCAGCTCTGATGGAACAACGCTTGTT
TTGGAAGTTCGAAGGGGCTGTTGTGTGTGTGGCCCTGATCTTCGCTTGTCTTGTCATCATTCGTCAGCGACAGCTGGACA
GAAAAGCTCTGGAAAAGGTCCGGAAGCAGATCGAGTCCATATAG

Library Parental gene expression (RPM)
SRP051959_spleen 11 .01 RPM
SRP051959_skeletal_muscle 15 .09 RPM
SRP051959_lymph_node 9 .31 RPM
SRP051959_lung 7 .94 RPM
SRP051959_liver 17 .72 RPM
SRP051959_kidney 12 .69 RPM
SRP051959_heart 7 .40 RPM
SRP051959_colon 9 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002520 ortholog_one2one 1 retrogene
retro_chof_1297,
Dasypus novemcinctus ENSDNOG00000000740 ortholog_one2many 1 retrogene
retro_dnov_1095,
Echinops telfairi ENSETEG00000008256 ortholog_one2one 1 retrogene
retro_etel_1340,
Felis catus ENSFCAG00000012590 ortholog_one2one 2 retrogenes
retro_fcat_1025, retro_fcat_1838,
Myotis lucifugus ENSMLUG00000013299 ortholog_one2one 1 retrogene
retro_mluc_2225,
Oryctolagus cuniculus ENSOCUG00000011788 ortholog_one2one 1 retrogene
retro_ocun_470,
Procavia capensis ENSPCAG00000003210 ortholog_one2one 1 retrogene
retro_pcap_301,
Pongo abelii ENSPPYG00000000791 ortholog_one2one 1 retrogene
retro_pabe_1886,
Sus scrofa ENSSSCG00000006559 ortholog_one2one 1 retrogene
retro_sscr_687,
Tupaia belangeri ENSTBEG00000012646 ortholog_one2one 1 retrogene
retro_tbel_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_496 52.21 74.83
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Download FASTA sequences of all ENSCJAG00000009973 retrocopies