Parental gene: | RBPMS, ENSCJAG00000012366 |
| Aliases: | None |
| Description: | RNA binding protein with multiple splicing [Source:HGNC Symbol;Acc:19097] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 13:28333462..28527392(+) |
>ENSCJAG00000012366
ATGAACAACGGCGGCAAAGCCGAGAAGGAGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATT
TGTCAGTGGTCTTCCTCTGGATATCAAACCTCGGGAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTATGAGGGTTCTC
TTATAAAGCTCACATCTAAACAGCCCGTAGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAAGCTGCAAAGAATGCT
TTGAATGGCATCCGCTTTGATCCTGAAATCCCGCAAACACTGCGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAA
GAATAAACTCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAATTCATTGCCAGAGAGCCATATG
AGCTCACAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGAGTTAGCGCCT
GCTCTACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGTGTTTCTCTCCTGAGGGAAAGCCCAACACACC
TGTCTTTTGTCCACTTCTCCAGCAAATTAGATTTGTCTCTGGCAATGTGTTTGTAACATACCAACCTACTGCAGACCAGC
AGAGGGAGCTCCCATGTTGA
ATGAACAACGGCGGCAAAGCCGAGAAGGAGAACACCCCGAGCGAGGCCAACCTTCAGGAGGAGGAGGTCCGGACCCTATT
TGTCAGTGGTCTTCCTCTGGATATCAAACCTCGGGAGCTCTATCTGCTTTTCAGACCATTTAAGGGCTATGAGGGTTCTC
TTATAAAGCTCACATCTAAACAGCCCGTAGGTTTTGTCAGTTTTGACAGTCGCTCAGAAGCAGAAGCTGCAAAGAATGCT
TTGAATGGCATCCGCTTTGATCCTGAAATCCCGCAAACACTGCGACTAGAGTTTGCTAAGGCAAACACGAAGATGGCCAA
GAATAAACTCGTAGGGACTCCAAACCCCAGTACTCCTCTGCCCAACACTGTACCTCAATTCATTGCCAGAGAGCCATATG
AGCTCACAGTGCCTGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACCCAGCGGAGTTAGCGCCT
GCTCTACCTCCTCCTGCTTTCACCTATCCCGCTTCACTGCATGCCCAGTGTTTCTCTCCTGAGGGAAAGCCCAACACACC
TGTCTTTTGTCCACTTCTCCAGCAAATTAGATTTGTCTCTGGCAATGTGTTTGTAACATACCAACCTACTGCAGACCAGC
AGAGGGAGCTCCCATGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .58 RPM |
| SRP051959_skeletal_muscle | 2 .69 RPM |
| SRP051959_lymph_node | 2 .81 RPM |
| SRP051959_lung | 12 .40 RPM |
| SRP051959_liver | 5 .44 RPM |
| SRP051959_kidney | 21 .72 RPM |
| SRP051959_heart | 25 .61 RPM |
| SRP051959_colon | 9 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001522 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000033727 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005200 | within_species_paralog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013982 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2705 | 72.78 | 79.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012366 retrocopies