Parental gene:

BCCIP, ENSCJAG00000012411

Aliases:None
Description:BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:978]
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:113756985..113785955(+)


>ENSCJAG00000012411
ATGGCGTCCAGGGCCAAACGGAGGGCTGTGGGAAGTGGGGTTCCGCAACCGCCGGGCGCCCCGGTCCCGCGCGACGACGA
AGAGGAAGATGAAGTCGACGATGAGGACGAAGACGATGACGACAGTGACGAGGAAGAAGATGAAGACGACGAGGTCGTCG
ACGAGGAAGTGAATATCGAATTTGAAGCTTATTCTATATCAGATAACGATTATGACGGAATTAAGAAATTATTGCAGCAG
CTTTTTCTAAAGGCTCCTGTGAACACTGCAGAGCTAACAGATGTCTTAATTCAACAGAACCATATTGGGAGTGTGATTAA
GCAAACGAATGTTTCAGAAGACAGCGATGATGATGTGGATGAAGATGAGATTTTTGGTTTCATAAGCCTTTTGAATTTAA
CTGAAAGAAAGGGTACTCAGTGTGCTGAACAAATTAAAGAGTTGATTCTAAGCTTCTGTGAGAAGAACTGTGAAAAGAGC
ATGGTTGAACAGCTGGACAAGCTTTTAAATGACACCACCAAGGCTGTGGGCCTTCTCCTAAGTGAAAGATTCATTAACGT
CCCTCCACAGATCGCTCTGCCCATGTACCAGCAGCTTCAGAAAGAAGTAGTGGAGGCACACAAAACCAATAAGCCATGTG
GGAAGTGCTGCTTTTACCTTCTGATTAGTAAGACATTTGTGGAAGCAGGAAAAAACAATTCCAGAAAGAAATGGAGCAAC
CAAAAGAAAGATGAGTTAATGTTTGCAAATGCAGAGGAAGAATTTTTCTATGAGAAGGCAATTCTGAAGTTCAGCTACTC
AGTGCAGGAGGAGAGCGACACCTGTCTGGGTGGCAGATGGTCTTTTGATGACGTACCAATGAAGCCTTTGCGAACTGTGA
TGTTAATTCCAGGCAACAAGATGAACGAAATAATGGATAAACTGAAAGAATATCTATCTGTGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 21 .28 RPM
SRP051959_skeletal_muscle 25 .14 RPM
SRP051959_lymph_node 24 .02 RPM
SRP051959_lung 25 .41 RPM
SRP051959_liver 26 .47 RPM
SRP051959_kidney 23 .10 RPM
SRP051959_heart 18 .79 RPM
SRP051959_colon 16 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012873 ortholog_one2one 1 retrogene
retro_cfam_1356,
Dasypus novemcinctus ENSDNOG00000002939 ortholog_one2one 1 retrogene
retro_dnov_530,
Macaca mulatta ENSMMUG00000008541 ortholog_one2one 1 retrogene
retro_mmul_472,
Oryctolagus cuniculus ENSOCUG00000008761 ortholog_one2one 1 retrogene
retro_ocun_843,
Otolemur garnettii ENSOGAG00000010901 ortholog_one2one 1 retrogene
retro_ogar_1184,
Ictidomys tridecemlineatus ENSSTOG00000011828 ortholog_one2one 4 retrogenes
retro_itri_1004, retro_itri_1130, retro_itri_1513, retro_itri_559,
Tupaia belangeri ENSTBEG00000002570 ortholog_one2one 4 retrogenes
retro_tbel_1259, retro_tbel_1260, retro_tbel_2963, retro_tbel_3044,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2838 94.51 75.16
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Download FASTA sequences of all ENSCJAG00000012411 retrocopies