Parental gene: | POLDIP2, ENSCJAG00000012566 |
| Aliases: | None |
| Description: | polymerase (DNA-directed), delta interacting protein 2 [Source:HGNC Symbol;Acc:23781] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:95784709..95795299(+) |
>ENSCJAG00000012566
ATGGCAGCCTGCGCAGCCCGGCGGGCCCTAGCCGTGGGCAGCCGCTGGTCCCGGTCGCTGACTGGGGCCCGGTGGCCCAG
GCCGCTCTGTGCGGAGGACGGCACTGGGGCCTTCTCGCCAGCGGCGAGCACGACGACGCGGAGGCACCTCTCGTCCCGAA
ACCGACCAGAGGGCAAAGTGTTGGAGACAGTCGGTGTGTTTGAGGTGCCAAAACAGAATGGAAAATATGAGACTGGGCAG
CTTTTCCTTCATAGCATTTTTGGCTACCGAGGTGTTGTCCTGTTTCCCTGGCAGGCCAGACTGTATGACCGGGATGTGGC
TTCTGCAGCTCCAGAAAAAGCAGAGAACCCTGCTGGTCATGGCTCTAAGGAGGTGAAAGGCAAAACTCACACCTACTATC
AGGTGCTGATTGATGCCCGAGACTGCCCACATATATCTCAGAGATCTCAGACAGAAGCTGTGACCTTCTTGGCTAACCAT
GATGACAGCCGGGCCCTCTATGCCATCCCAGGCCTGGACTATGTCAGCCATGAAGACATCCTCCCCTACACCTCCACTGA
TCAGGTTCCCATCCAACATGAGCTCTTTGAAAGATTTCTTCTGTATGACCAAACAAAAGCACCCCCTTTTGTGGCTCGGG
AGACATTAAGGGCCTGGCAAGAGAAGAATCACCCGTGGCTGGAGCTCTCCGATGTTCACCGGGAAACAACTGAGAACATA
CGTGTCACTGTCATCCCCTTCTACATGGGCATGAGGGAAGCTCAGAATTCCCACGTGTACTGGTGGCGCTACTGTATCCG
TTTGGAGAACCTTGACAGTGACGTGGTACAGCTCCGGGAGCGGCACTGGAGGATATTCAGTCTCTCCGGCACCCTGGAGA
CAGTGCGAGGTCGAGGGGTAGTGGGCAGGGAACCAGTGTTATCCAAGGAGCAGCCCGCGTTCCAGTATAGCAGCCACGTC
TCGCTGCAGGCTTCTAGTGGGCACATGTGGGGCACATTCCGCTTCGAAAGACCTGATGGCTCCCACTTTGATGTTCGGAT
CCCTCCCTTCTCTCTGGAAAGCAATAAAGATGAGAAGACACCACCCTCAGGCCTTCACTGGTAG
ATGGCAGCCTGCGCAGCCCGGCGGGCCCTAGCCGTGGGCAGCCGCTGGTCCCGGTCGCTGACTGGGGCCCGGTGGCCCAG
GCCGCTCTGTGCGGAGGACGGCACTGGGGCCTTCTCGCCAGCGGCGAGCACGACGACGCGGAGGCACCTCTCGTCCCGAA
ACCGACCAGAGGGCAAAGTGTTGGAGACAGTCGGTGTGTTTGAGGTGCCAAAACAGAATGGAAAATATGAGACTGGGCAG
CTTTTCCTTCATAGCATTTTTGGCTACCGAGGTGTTGTCCTGTTTCCCTGGCAGGCCAGACTGTATGACCGGGATGTGGC
TTCTGCAGCTCCAGAAAAAGCAGAGAACCCTGCTGGTCATGGCTCTAAGGAGGTGAAAGGCAAAACTCACACCTACTATC
AGGTGCTGATTGATGCCCGAGACTGCCCACATATATCTCAGAGATCTCAGACAGAAGCTGTGACCTTCTTGGCTAACCAT
GATGACAGCCGGGCCCTCTATGCCATCCCAGGCCTGGACTATGTCAGCCATGAAGACATCCTCCCCTACACCTCCACTGA
TCAGGTTCCCATCCAACATGAGCTCTTTGAAAGATTTCTTCTGTATGACCAAACAAAAGCACCCCCTTTTGTGGCTCGGG
AGACATTAAGGGCCTGGCAAGAGAAGAATCACCCGTGGCTGGAGCTCTCCGATGTTCACCGGGAAACAACTGAGAACATA
CGTGTCACTGTCATCCCCTTCTACATGGGCATGAGGGAAGCTCAGAATTCCCACGTGTACTGGTGGCGCTACTGTATCCG
TTTGGAGAACCTTGACAGTGACGTGGTACAGCTCCGGGAGCGGCACTGGAGGATATTCAGTCTCTCCGGCACCCTGGAGA
CAGTGCGAGGTCGAGGGGTAGTGGGCAGGGAACCAGTGTTATCCAAGGAGCAGCCCGCGTTCCAGTATAGCAGCCACGTC
TCGCTGCAGGCTTCTAGTGGGCACATGTGGGGCACATTCCGCTTCGAAAGACCTGATGGCTCCCACTTTGATGTTCGGAT
CCCTCCCTTCTCTCTGGAAAGCAATAAAGATGAGAAGACACCACCCTCAGGCCTTCACTGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 16 .20 RPM |
| SRP051959_skeletal_muscle | 31 .21 RPM |
| SRP051959_lymph_node | 10 .78 RPM |
| SRP051959_lung | 12 .64 RPM |
| SRP051959_liver | 25 .99 RPM |
| SRP051959_kidney | 26 .60 RPM |
| SRP051959_heart | 28 .89 RPM |
| SRP051959_colon | 11 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018665 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007781 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1445 | 87.61 | 61.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012566 retrocopies