Parental gene:

AGK, ENSCJAG00000013589

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:104292875..104512348(-)


>ENSCJAG00000013589
ATGATGGTGTTCTTTAAAACACTTCGAAATCATTGGAAGAAAACCACAGCTGGGCTTTGCCTGCTGACCTGGGGAGGCAA
TTGGCTCTATGGAAAACACTGTGATAACCTGCTTAGGAGAGCAGCCTGTCAAGAAGCTCAGGTGTTTGGCAATCAACTCA
TTCCTCCCAATGCACAAGTGAAGAAGGCAACTGTTTTTCTCAATCCTGCAGCTTGCAAAGGCAAAGCCAGGAATCTATTT
GAAAAAAATGCTGCCCCGATTTTACATTTATCCGGCATGGATGTGACTATTGTTAAGACAGATTATGAGGGACAAGCCAA
GAAACTCCTGGAACTGATGGAAAACACAGATGTGATCATTGTTGCAGGAGGAGATGGGACACTGCAGGAGGTTGTTACTG
GAGTTCTTCGACGAACAGATGAGGCTACCTTCAGTAAGATTCCCATTGGATTTATCCCACTGGGAGAGACCAGCAGTTTG
AGTCATACCCTCTTTGCCGAAAGTGGAAACAAAGTCCAACATATTACTGATGCCACGCTTGCCATTGTGAAAGGAGAGAC
AGTTCCACTTGATGTCTTGCGGATCAAGGGTGAAAAGGAACAGCCTGTGTTTGCAATGACCGGCCTTCGATGGGGATCCT
TCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGTCCTCTAAAAACCAAAGCAGCCCACTTTTTCAGCACT
CTTAAGGAGTGGCCTCAGACTCATCAAGCCTCTATCTCGTACACGGGACCTACAGAGAGACCTCCCAGTGAACCAGAGGA
GACACCTGTACAAAGGCCTTCTTTGTACAGGAGAATATTACGAAGGCTTGCATCCTTCTGGGCACAACCACAGGATGCCC
TTTCCCAAGAGGTGAGCCCAGAGGTCTGGAAAGATGTGCAGCTGTCCACAATTGAACTGTCCATCACAACACGGAACAAT
CAGCTTGACCTGACGAGCAAAGAAGATTTTATGAACATCTGCATTGAACCTGACTCCATCAGCAAAGGAGACTTTATAAC
TATAGGAAGTCGAAAGGTGAGGAACCCCAAGCTGCATGCTGAGGGCACGGAGTGTCTCCAAGCCAGCCAGTGCACTTTGC
TTGTCCCCGAGGGAGCCGGGGGCTCTTTTAGCATCGACAGTGAGGAGTATGAAGCAATGCCTGTGGAGGTGAAACTGCTC
CCCAGAAAGCTGCAGTTCTTCTGTGATCCTAGGAAGAGAGAGATGCTGGGAAGCCCCACCCAGTGA

Library Parental gene expression (RPM)
SRP051959_colon 6 .99 RPM
SRP051959_heart 12 .38 RPM
SRP051959_kidney 12 .14 RPM
SRP051959_liver 22 .59 RPM
SRP051959_lung 9 .78 RPM
SRP051959_lymph_node 12 .83 RPM
SRP051959_skeletal_muscle 7 .36 RPM
SRP051959_spleen 10 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000008821 ortholog_one2many 1 retrogene
retro_ggor_3061,
Loxodonta africana ENSLAFG00000002479 ortholog_one2many 1 retrogene
retro_lafr_403,
Microcebus murinus ENSMICG00000002561 ortholog_one2many 1 retrogene
retro_mmur_850,
Macaca mulatta ENSMMUG00000021017 ortholog_one2many 1 retrogene
retro_mmul_2637,
Mus musculus ENSMUSG00000029916 ortholog_one2many 1 retrogene
retro_mmus_1130,
Nomascus leucogenys ENSNLEG00000002291 ortholog_one2many 1 retrogene
retro_nleu_2349,
Pongo abelii ENSPPYG00000018064 ortholog_one2many 1 retrogene
retro_pabe_3812,
Pan troglodytes ENSPTRG00000019775 ortholog_one2many 2 retrogenes
retro_ptro_3269, retro_ptro_3311,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3228 85.00 61.05
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Download FASTA sequences of all ENSCJAG00000013589 retrocopies