Parental gene: | TRAPPC4, ENSCJAG00000013703 |
| Aliases: | None |
| Description: | trafficking protein particle complex 4 [Source:HGNC Symbol;Acc:19943] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:16660150..16664973(+) |
>ENSCJAG00000013703
ATGGCGATTTTTAGTGTGTATGTGGTGAACAAAGCTGGCGGCCTGATTTACCAGCTGGACAGCTACGCGCCGCGGGCCGA
GGCTGAGAAAACTTTCAGTTATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCGTGTGCTGGTTGCTTTCGGCCAGC
GGGACGGTATCCGAGTGGGCCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAAGTACACGGCCGACGGGAAA
GAGGTACTGGAGTATCTGGGTAACCCTGCTAATTACCCGGTGTCCATTCGATTTGGCCGTCCCCGCCTCACTTCTAATGA
GAAGCTCATGCTGGCCTCTATGTTCCACTCGCTCTTTGCCATCGGCTCTCAGCTGTCTCCTGAACAGGGAAGCTCAGGCA
TTGAGATGCTGGAGACAGATACATTCAAATTGCACTGCTACCAGACACTGACAGGGATCAAATTTGTGGTTCTAGCAGAT
CCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCCTCAAGAATCCATTCTA
CTCCTTAGAAATGCCCATCAGGTGTGAGCTATTTGACCAGAATTTGAAGCTAGCCCTGGAGGTGGCTGAGAAGGCTGGAA
CTTTTGGACCTGGGTCATAG
ATGGCGATTTTTAGTGTGTATGTGGTGAACAAAGCTGGCGGCCTGATTTACCAGCTGGACAGCTACGCGCCGCGGGCCGA
GGCTGAGAAAACTTTCAGTTATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCGTGTGCTGGTTGCTTTCGGCCAGC
GGGACGGTATCCGAGTGGGCCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAAGTACACGGCCGACGGGAAA
GAGGTACTGGAGTATCTGGGTAACCCTGCTAATTACCCGGTGTCCATTCGATTTGGCCGTCCCCGCCTCACTTCTAATGA
GAAGCTCATGCTGGCCTCTATGTTCCACTCGCTCTTTGCCATCGGCTCTCAGCTGTCTCCTGAACAGGGAAGCTCAGGCA
TTGAGATGCTGGAGACAGATACATTCAAATTGCACTGCTACCAGACACTGACAGGGATCAAATTTGTGGTTCTAGCAGAT
CCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCCTCAAGAATCCATTCTA
CTCCTTAGAAATGCCCATCAGGTGTGAGCTATTTGACCAGAATTTGAAGCTAGCCCTGGAGGTGGCTGAGAAGGCTGGAA
CTTTTGGACCTGGGTCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .58 RPM |
| SRP051959_skeletal_muscle | 4 .78 RPM |
| SRP051959_lymph_node | 9 .06 RPM |
| SRP051959_lung | 8 .48 RPM |
| SRP051959_liver | 18 .30 RPM |
| SRP051959_kidney | 14 .38 RPM |
| SRP051959_heart | 5 .05 RPM |
| SRP051959_colon | 5 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012383 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007885 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004759 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014340 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_450 | 87.18 | 53.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013703 retrocopies