Parental gene: | AP1M1, ENSCJAG00000014070 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:15186902..15224762(+) |
>ENSCJAG00000014070
GGCCGCGCCCGGCCTCGCTCAACGCCCGGTAGTCGCTGCCGCCGCCCTTGGCCGCTGCGGAGGCTTCCTGCAGCCACCAT
GTCCGCCAGCGCCGTCTACGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCGGAACTACCGTGGCGATGTGGACATGT
CGGAGGTGGAGCACTTCATGCCCATCCTGATGGAGAAGGAGGAGGAGGGGATGCTGTCACCCATCCTGGCCCACGGCGGG
GTCCGCTTCATGTGGATCAAACACAACAACCTGTATTTGGTCGCCACGTCCAAGAAGAACGCGTGCGTGTCACTGGTGTT
CTCCTTCCTTTATAAGGTGGTACAGGTGTTTTCCGAGTACTTCAAGGAGCTGGAGGAGGAGAGCATCCGGGACAACTTTG
TCATCATCTACGAGCTGCTGGATGAGCTCATGGATTTCGGCTACCCCCAGACCACTGACAGCAAGATCCTGCAGGAGTAC
ATCACCCAGGAAGGCCACAAGCTGGAAACAGGGGCCCCACGGCCCCCAGCCACCGTCACCAACGCGGTTTCCTGGCGGTC
CGAAGGCATCAAGTATCGGAAGAATGAGGTGTTCTTGGACGTCATCGAGTCTGTTAACCTCTTGCCCCAATACCCAGGCG
TGGGTTGGGGGCTCAGGGGACAAACAGGTCAGCGCCAACGGCAACGCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATG
CGGGTGTTCCTCTCAGGGATGCCTGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACAGGCCGCGGCAA
AAGCAAATCCGTGGAGCTGGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATCACGCTTCGAGAACGACCGCACTATCT
CCTTCATCCCGCCTGATGGCGAGTTCGAGCTCATGTCCTACCGCCTCAACACCCACGTCAAGCCTTTGATATGGATCGAG
TCGGTGATTGAGAAGCACTCCCACAGCCGCATTGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC
CAACAACGTGGAGATCCACATTCCCGTGCCCAACGATGCCGACTCGCCCAAGTTCAAGACGACAGTGGGGAGTGTCAAGT
GGGTCCCCGAGAACAGTGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGTGGCAAGGAGTACCTGATGCGGGCCCACTTC
GGCCTGCCCAGCGTGGAAGCAGAGGACAAGGAGGGCAAACCCCCAATCAGTGTCAAGTTCGAGATCCCTTACTTCACTAC
CTCTGGCATCCAGGTGCGCTACCTGAAGATCATTGAGAAGAGCGGGTACCAGGCCTTGCCTTGGGTGCGTTACATCACAC
AGAACGGAGATTACCAGCTCCGGACCCAGTGA
GGCCGCGCCCGGCCTCGCTCAACGCCCGGTAGTCGCTGCCGCCGCCCTTGGCCGCTGCGGAGGCTTCCTGCAGCCACCAT
GTCCGCCAGCGCCGTCTACGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCGGAACTACCGTGGCGATGTGGACATGT
CGGAGGTGGAGCACTTCATGCCCATCCTGATGGAGAAGGAGGAGGAGGGGATGCTGTCACCCATCCTGGCCCACGGCGGG
GTCCGCTTCATGTGGATCAAACACAACAACCTGTATTTGGTCGCCACGTCCAAGAAGAACGCGTGCGTGTCACTGGTGTT
CTCCTTCCTTTATAAGGTGGTACAGGTGTTTTCCGAGTACTTCAAGGAGCTGGAGGAGGAGAGCATCCGGGACAACTTTG
TCATCATCTACGAGCTGCTGGATGAGCTCATGGATTTCGGCTACCCCCAGACCACTGACAGCAAGATCCTGCAGGAGTAC
ATCACCCAGGAAGGCCACAAGCTGGAAACAGGGGCCCCACGGCCCCCAGCCACCGTCACCAACGCGGTTTCCTGGCGGTC
CGAAGGCATCAAGTATCGGAAGAATGAGGTGTTCTTGGACGTCATCGAGTCTGTTAACCTCTTGCCCCAATACCCAGGCG
TGGGTTGGGGGCTCAGGGGACAAACAGGTCAGCGCCAACGGCAACGCCTGCGCAGCGAGATCGTGGGCTCCATCAAGATG
CGGGTGTTCCTCTCAGGGATGCCTGAGCTGCGCCTGGGCCTCAACGACAAGGTCCTCTTTGACAACACAGGCCGCGGCAA
AAGCAAATCCGTGGAGCTGGAGGATGTGAAGTTCCACCAGTGTGTGCGGCTATCACGCTTCGAGAACGACCGCACTATCT
CCTTCATCCCGCCTGATGGCGAGTTCGAGCTCATGTCCTACCGCCTCAACACCCACGTCAAGCCTTTGATATGGATCGAG
TCGGTGATTGAGAAGCACTCCCACAGCCGCATTGAGTACATGATCAAGGCCAAAAGCCAGTTCAAGCGGCGGTCAACAGC
CAACAACGTGGAGATCCACATTCCCGTGCCCAACGATGCCGACTCGCCCAAGTTCAAGACGACAGTGGGGAGTGTCAAGT
GGGTCCCCGAGAACAGTGAGATCGTGTGGTCCATCAAGTCCTTCCCGGGTGGCAAGGAGTACCTGATGCGGGCCCACTTC
GGCCTGCCCAGCGTGGAAGCAGAGGACAAGGAGGGCAAACCCCCAATCAGTGTCAAGTTCGAGATCCCTTACTTCACTAC
CTCTGGCATCCAGGTGCGCTACCTGAAGATCATTGAGAAGAGCGGGTACCAGGCCTTGCCTTGGGTGCGTTACATCACAC
AGAACGGAGATTACCAGCTCCGGACCCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .98 RPM |
| SRP051959_skeletal_muscle | 12 .58 RPM |
| SRP051959_lymph_node | 13 .95 RPM |
| SRP051959_lung | 10 .87 RPM |
| SRP051959_liver | 14 .95 RPM |
| SRP051959_kidney | 13 .67 RPM |
| SRP051959_heart | 10 .80 RPM |
| SRP051959_colon | 6 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012998 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1985 | 67.92 | 99.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2135 | 76.63 | 81.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3873 | 63.70 | 99.76 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000014070 retrocopies