Parental gene:

ARD1A, ENSCJAG00000014506

Aliases:ARD1A, NAA10
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:140468039..140473121(-)


>ENSCJAG00000014506
ATGAACATCCGCAATGCGAGGCCGGAGGACCTGATGAACATGCAGCACTGCAACCTCCTCTGCCTGCCCGAGAACTACCA
GATGAAATACTACTTCTACCATGGCCTCTCCTGGCCCCAGCTCTCTTACATTGCTGAGGACGAGAATGGGAAGATTGTGG
GGTATGTCCTGGCCAAAATGGAAGAAGACCCAGATGATGTGCCCCATGGACATATCACCTCATTGGCTGTGAAGCGTTCC
CATCGGCGCCTCGGTCTGGCACAGAAACTGATGGACCAGGCCTCTCGAGCGATGATAGAGAACTTCAATGCCAAATACGT
CTCCCTGCATGTCAGGAAGAGTAACCGGGCCGCCCTGCACCTCTATTCCAACACCCTCAACTTTCAGATCAGTGAAGTGG
AGCCCAAATACTATGCAGATGGGGAGGATGCCTACGCCATGAAGCGGGATCTCACCCAGATGGCGGACGAGCTGAGGCGG
CACCTGGAGCTGAAGGAGAAGGGCAGGCACATGGTGCTGGGCGCCATGGAGAACAAGGTGGAGAGCAAAGGCAGCTCACC
TCCGAACTCAGGAGAGGCCTGTCGTGAGGAGAAGGGCCTGGCTGCTGAGGATAGTGGAGGGGACAGCAAGGACCTCAGCG
AGGTCAGCGAGACCACAGAGAGCACAGATGTCAAAGACAGCTCAGAGGCCTCCGACTCGGCCTCCTAG

Library Parental gene expression (RPM)
SRP051959_spleen 9 .56 RPM
SRP051959_skeletal_muscle 8 .04 RPM
SRP051959_lymph_node 13 .20 RPM
SRP051959_lung 9 .45 RPM
SRP051959_liver 12 .91 RPM
SRP051959_kidney 11 .27 RPM
SRP051959_heart 6 .49 RPM
SRP051959_colon 5 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018457 ortholog_one2many 1 retrogene
retro_amel_162,
Bos taurus ENSBTAG00000047702 ortholog_one2many 1 retrogene
retro_btau_177,
Canis familiaris ENSCAFG00000019415 ortholog_one2many 1 retrogene
retro_cfam_167,
Cavia porcellus ENSCPOG00000011495 possible_ortholog 1 retrogene
retro_cpor_10,
Dipodomys ordii ENSDORG00000002753 possible_ortholog 1 retrogene
retro_dord_529,
Equus caballus ENSECAG00000015203 ortholog_one2many 1 retrogene
retro_ecab_717,
Felis catus ENSFCAG00000028705 ortholog_one2many 1 retrogene
retro_fcat_51,
Homo sapiens ENSG00000102030 ortholog_one2one 1 retrogene
retro_hsap_13,
Gorilla gorilla ENSGGOG00000009788 ortholog_one2one 1 retrogene
retro_ggor_196,
Macropus eugenii ENSMEUG00000006054 ortholog_many2many 2 retrogenes
retro_meug_1787, retro_meug_554,
Myotis lucifugus ENSMLUG00000014267 ortholog_one2many 1 retrogene
retro_mluc_152,
Macaca mulatta ENSMMUG00000000322 ortholog_one2one 1 retrogene
retro_mmul_21,
Mustela putorius furo ENSMPUG00000008989 ortholog_one2many 1 retrogene
retro_mputfur_1424,
Mus musculus ENSMUSG00000031388 ortholog_one2one 1 retrogene
retro_mmus_1416,
Nomascus leucogenys ENSNLEG00000013724 ortholog_one2one 1 retrogene
retro_nleu_57,
Otolemur garnettii ENSOGAG00000013263 ortholog_one2one 1 retrogene
retro_ogar_260,
Pongo abelii ENSPPYG00000020861 ortholog_one2one 1 retrogene
retro_pabe_2530,
Pan troglodytes ENSPTRG00000022419 ortholog_one2one 1 retrogene
retro_ptro_23,
Pteropus vampyrus ENSPVAG00000000463 ortholog_one2many 1 retrogene
retro_pvam_1225,
Sarcophilus harrisii ENSSHAG00000005952 ortholog_one2many 1 retrogene
retro_shar_362,
Sus scrofa ENSSSCG00000012791 ortholog_one2many 1 retrogene
retro_sscr_987,
Ictidomys tridecemlineatus ENSSTOG00000010237 ortholog_one2one 1 retrogene
retro_itri_1435,
Tursiops truncatus ENSTTRG00000007455 ortholog_one2many 1 retrogene
retro_ttru_198,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_132 80.85 100.00
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Download FASTA sequences of all ENSCJAG00000014506 retrocopies