Parental gene: | ENSCJAG00000015051 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 20:26385311..26419354(-) |
>ENSCJAG00000015051
CTAGCTTTTCCCCAAAGACCAAAAGAGAAACAGTACAGCATGCTGGGCTCTGGATTTAAAGCTGAGCGCTTAAGAGTCAA
TTTGAGATTAGTCATAAATCGCCTTAAACTTTTGGAGAAAAAAAAAACGGAACTGGCCCAGAAAGCAAGGAAGGAGATTG
CCGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGGATCCGTGTGGAGCACATTATCCGGGAAGACTACCTTGTGGAG
GCCATGGAGATCCTGGAGCTGTACTGTGATCTGCTGCTGGCTCGGTTTGGCCTTATCCAGTCTATGAAGGAGCTAGATTC
TGGTCTGGCTGAATCTGTGTCTACACTGATCTGGGCTGCTCCTCGACTCCAGTCAGAAGTGGCTGAGTTGAAAATAGTTG
CTGATCAGCTCTGTGCCAAGTATAGCAAGGAATATGGCAAGTTATGTAGGACCAACCAGATTGGAACTGTGAATGACAGG
CTAATGCACAAACTGAGTGTGGAAGCCCCACCTAAAATCCTGGTGGAGAGATACCTGATTGAAATTGCGAAGAATTACAA
TGTACCCTATGAGCCTGACTCTGTGGTCATGGCAGAAGCCCCACCTGGGGTAGAGACAGATCTTATTGATGTTGGGTTCA
CAGATGATGTGAAGAAAGGAGGCCCTGGAAGAGGAGGAGGAGGGGGTGGTGGCTTCATAGCACCAGTTGGTGGACCTGAT
GGAACAGTGCCAATGCCCATGCCCATGCCCATGCCATCTGCAAATACGCCTTTCTCATATCCACTGCCAAAGGGACCATC
TGATTTCAATGGATTGCCAGTGGGGACTTATCAGGCCTTTCCCAATATTCATCCACCTCAGATACCAGCAACTCCCCCAT
CGTATGAATCTGTTGATGACATTAATGCTGATAAGAATATCTCTTCTGCACAGATTGTTGGTCCTGGACCCAAGCCAGAT
GCCTCTGCGAAGCTTCCTTCCAGACCTGTGGATCACTATGACAACTTTGTCTTACCAGAGTTGCCGTCTGTGCCAGACAC
ACTACCAACTGCATCTGCTGGTGCCAACACCTCAGCCTCTGAAGACATTGATTTTGATGATCTTTCACGGAGGTTTGAAG
AGCTGAAAAAGAAAACATAG
CTAGCTTTTCCCCAAAGACCAAAAGAGAAACAGTACAGCATGCTGGGCTCTGGATTTAAAGCTGAGCGCTTAAGAGTCAA
TTTGAGATTAGTCATAAATCGCCTTAAACTTTTGGAGAAAAAAAAAACGGAACTGGCCCAGAAAGCAAGGAAGGAGATTG
CCGACTATCTGGCTGCTGGGAAAGATGAACGAGCTCGGATCCGTGTGGAGCACATTATCCGGGAAGACTACCTTGTGGAG
GCCATGGAGATCCTGGAGCTGTACTGTGATCTGCTGCTGGCTCGGTTTGGCCTTATCCAGTCTATGAAGGAGCTAGATTC
TGGTCTGGCTGAATCTGTGTCTACACTGATCTGGGCTGCTCCTCGACTCCAGTCAGAAGTGGCTGAGTTGAAAATAGTTG
CTGATCAGCTCTGTGCCAAGTATAGCAAGGAATATGGCAAGTTATGTAGGACCAACCAGATTGGAACTGTGAATGACAGG
CTAATGCACAAACTGAGTGTGGAAGCCCCACCTAAAATCCTGGTGGAGAGATACCTGATTGAAATTGCGAAGAATTACAA
TGTACCCTATGAGCCTGACTCTGTGGTCATGGCAGAAGCCCCACCTGGGGTAGAGACAGATCTTATTGATGTTGGGTTCA
CAGATGATGTGAAGAAAGGAGGCCCTGGAAGAGGAGGAGGAGGGGGTGGTGGCTTCATAGCACCAGTTGGTGGACCTGAT
GGAACAGTGCCAATGCCCATGCCCATGCCCATGCCATCTGCAAATACGCCTTTCTCATATCCACTGCCAAAGGGACCATC
TGATTTCAATGGATTGCCAGTGGGGACTTATCAGGCCTTTCCCAATATTCATCCACCTCAGATACCAGCAACTCCCCCAT
CGTATGAATCTGTTGATGACATTAATGCTGATAAGAATATCTCTTCTGCACAGATTGTTGGTCCTGGACCCAAGCCAGAT
GCCTCTGCGAAGCTTCCTTCCAGACCTGTGGATCACTATGACAACTTTGTCTTACCAGAGTTGCCGTCTGTGCCAGACAC
ACTACCAACTGCATCTGCTGGTGCCAACACCTCAGCCTCTGAAGACATTGATTTTGATGATCTTTCACGGAGGTTTGAAG
AGCTGAAAAAGAAAACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 34 .69 RPM |
| SRP051959_skeletal_muscle | 56 .36 RPM |
| SRP051959_lymph_node | 38 .83 RPM |
| SRP051959_lung | 40 .95 RPM |
| SRP051959_liver | 18 .76 RPM |
| SRP051959_kidney | 42 .93 RPM |
| SRP051959_heart | 28 .85 RPM |
| SRP051959_colon | 34 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000002409 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001863 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007857 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007522 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002743 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1906 | 94.04 | 61.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015051 retrocopies