Parental gene: | SAMM50, ENSCJAG00000015070 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:203975963..204020002(+) |
>ENSCJAG00000015070
ATGGGGACTGTGCACGCCCGGAGTTTGGAGCCTCTTCCATCAAGTGGACCTGATTTTGGAGGATTAGGAGAAGAAGCTGA
ATTTGTTGAAGTTGAACCTGAAGCTAAACAGGAAATTCTTGAAAACAAAGATGTGGTTGTTCAACATGTTCATTTTGATG
GACTTGGAAGGACAAAAGATGATATCATCATTTGTGAAATTGGAGATGTTTTCAAGGCCAAAAACCTAATTGAGGTAATG
CGAAAATCTCATGAAGCCCGTGAAAAATTGCTTCGCCTTGGGATTTTTAGACAGGTGGATGTTTTGATTGACACATGTCA
AGGTGATGATGCACTTCCAAATGGGTTGGACGTTACCTTCGAAGTAACCGAATTAAGGAGATTGACGGGCAGTTATAACA
CCATGGTTGGAAACAATGAAGGCAGTATGGTACTTGGCCTCAAACTCCCTAATCTTCTTGGTCGTGCAGAAAAGGTGACC
TTTCAGTTTTCCTATGGAACAAAAGAAACGTCGTATGGCCTGTCCTTCTTCAAACCCCGGCCTGGAAGCTTCGAAAGAAA
TTTCTCTGTAAACTTATATAAAGTTACGGGACAGTTCCCTTGGAGCTCATTGCGGGAGACGGACAGAGGAATGTCAGCTG
AGTACAGTTTTCCCATATGGAAGACCAGCCACACCGTCAAGTGGGAAGGCGTGTGGCGAGAGCTGGGCTGCCTCTCCAGG
ACGGCTTCCTTTGCTGTTCGAAAAGAAAGTGGACATTCACTGAAGTCATCTCTTTCGCATGCCATGGTCATCGATTCTCG
GAATTCTTCCATCTTACCAAGAAGAGGTGCTTTGCTGAAAGTTAACCAGGAACTGGCAGGCTACACTGGTGGGGATGTGA
GCTTCATCAAAGAAGATTTTGAACTGCAGGTGAACAAGCCACTCATATTTGATTCAGTGTTTTCAGCGTCTCTCTGGGGT
GGAATGTTGGTACCCATTGGTGATAAGCCATCGAGTATTGCCGATAGGTTTTACCTCGGGGGACCCACAAGCGTCCGAGG
ATTCAGCATGCACAGCATCGGGCCGCAGAGCGAAGGAGACTACCTAGGTGGAGAAGCGTACTGGGCTGGCGGCCTGCACC
TCTACACCCCGTTACCTTTCCGGCCTGGCCAGGGGGGCTTTGGAGAACTTTTCCGAACACACTTCTTTCTCAACGCCGGA
AACCTCTGCAACCTCAACTATGGGGAGGGCCCCAAAGCTCACATCCGGAAGCTGGCTGAGTGCATCCGCTGGTCGTATGG
GGCCGGGATCGTCCTCAGGCTTGGCAACATTGCGCGGCTGGAACTTAATTACTGCATCCCCATGGGAGTACAGACGGGCG
ACAGGATATGTGATGGCGTCCAGTTTGGAGCTGGGATAAGATTCCTTTAG
ATGGGGACTGTGCACGCCCGGAGTTTGGAGCCTCTTCCATCAAGTGGACCTGATTTTGGAGGATTAGGAGAAGAAGCTGA
ATTTGTTGAAGTTGAACCTGAAGCTAAACAGGAAATTCTTGAAAACAAAGATGTGGTTGTTCAACATGTTCATTTTGATG
GACTTGGAAGGACAAAAGATGATATCATCATTTGTGAAATTGGAGATGTTTTCAAGGCCAAAAACCTAATTGAGGTAATG
CGAAAATCTCATGAAGCCCGTGAAAAATTGCTTCGCCTTGGGATTTTTAGACAGGTGGATGTTTTGATTGACACATGTCA
AGGTGATGATGCACTTCCAAATGGGTTGGACGTTACCTTCGAAGTAACCGAATTAAGGAGATTGACGGGCAGTTATAACA
CCATGGTTGGAAACAATGAAGGCAGTATGGTACTTGGCCTCAAACTCCCTAATCTTCTTGGTCGTGCAGAAAAGGTGACC
TTTCAGTTTTCCTATGGAACAAAAGAAACGTCGTATGGCCTGTCCTTCTTCAAACCCCGGCCTGGAAGCTTCGAAAGAAA
TTTCTCTGTAAACTTATATAAAGTTACGGGACAGTTCCCTTGGAGCTCATTGCGGGAGACGGACAGAGGAATGTCAGCTG
AGTACAGTTTTCCCATATGGAAGACCAGCCACACCGTCAAGTGGGAAGGCGTGTGGCGAGAGCTGGGCTGCCTCTCCAGG
ACGGCTTCCTTTGCTGTTCGAAAAGAAAGTGGACATTCACTGAAGTCATCTCTTTCGCATGCCATGGTCATCGATTCTCG
GAATTCTTCCATCTTACCAAGAAGAGGTGCTTTGCTGAAAGTTAACCAGGAACTGGCAGGCTACACTGGTGGGGATGTGA
GCTTCATCAAAGAAGATTTTGAACTGCAGGTGAACAAGCCACTCATATTTGATTCAGTGTTTTCAGCGTCTCTCTGGGGT
GGAATGTTGGTACCCATTGGTGATAAGCCATCGAGTATTGCCGATAGGTTTTACCTCGGGGGACCCACAAGCGTCCGAGG
ATTCAGCATGCACAGCATCGGGCCGCAGAGCGAAGGAGACTACCTAGGTGGAGAAGCGTACTGGGCTGGCGGCCTGCACC
TCTACACCCCGTTACCTTTCCGGCCTGGCCAGGGGGGCTTTGGAGAACTTTTCCGAACACACTTCTTTCTCAACGCCGGA
AACCTCTGCAACCTCAACTATGGGGAGGGCCCCAAAGCTCACATCCGGAAGCTGGCTGAGTGCATCCGCTGGTCGTATGG
GGCCGGGATCGTCCTCAGGCTTGGCAACATTGCGCGGCTGGAACTTAATTACTGCATCCCCATGGGAGTACAGACGGGCG
ACAGGATATGTGATGGCGTCCAGTTTGGAGCTGGGATAAGATTCCTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .08 RPM |
| SRP051959_skeletal_muscle | 27 .06 RPM |
| SRP051959_lymph_node | 13 .31 RPM |
| SRP051959_lung | 10 .67 RPM |
| SRP051959_liver | 26 .47 RPM |
| SRP051959_kidney | 17 .24 RPM |
| SRP051959_heart | 17 .75 RPM |
| SRP051959_colon | 10 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000100347 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015446 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015693 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011918 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014483 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_605 | 68.13 | 75.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2277 | 92.34 | 91.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015070 retrocopies