Parental gene:

MAP2K2, ENSCJAG00000015084

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:3745183..3781371(-)


>ENSCJAG00000015084
ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTGCCATCGCCGAGGGCCCGTCCCCCACCAGCGA
GGGCGCCTCTGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTAGAGGAGCTGGAACTTGATGAGCAGCAGAAGAAGCGGC
TGGAAGCCTTCCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTTGAGAGGATCTCGGAGCTGGGCGCA
GGCAACGGCGGCGTGGTCACCAAGGTCCAACACAGACCCTCGGGCCTTATCATGGCCCGGAAGCTGATCCACCTGGAGAT
CAAGCCGGCCATCCGGAACCAGATCATCCGAGAGCTGCAGGTCCTGCATGAGTGCAACTCCCCCTACATCGTGGGCTTCT
ACGGGGCCTTCTACAGCGACGGGGAGATCAGCATCTGCATGGAGCACATGGATGGCGGCTCCCTGGACCAGGTGCTGAAA
GAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGTCAGCATTGCGGTGCTCCGGGGCTTGGCGTACCTCCGAGAGAA
GCACCAGATCATGCACCGAGATGTGAAGCCTTCCAACATCCTGGTGAACTCCAGAGGGGAGATCAAGCTGTGCGACTTTG
GGGTGAGCGGGCAGCTCATCGACTCCATGGCCAACTCCTTCGTGGGGACACGCTCCTACATGGCTCCGGAGCGGTTGCAG
GGCACGCACTACTCCGTGCAGTCGGACATCTGGAGCATGGGCCTGTCCCTGGTGGAGCTGGCCATCGGGAGGTACCCCAT
CCCCCCGCCTGACGCCAAGGAGCTGGAGGCCATCTTTGGTCGGCCCGTGGTCGACGGAGCAGAAGGAGAGCCTCACAGCA
TCTCACCTCGGCCGAGACCCCCTGGGCGCCCCATGAGCGGTCACGGGATGGACAGCCGACCTGCCATGGCCATCTTTGAA
CTGCTGGACTATATTGTGAATGAGCCGCCTCCCAAGCTGCCCAACGGTGTGTTCACCCCGGACTTCCAGGAGTTTGTCAA
TAGATGCCTCATCAAGAACCCAGCGGAGCGGGCGGACCTGAAGATGCTCACGAACCACGCCTTCATCAAGCGGTCCGAGG
TGGAAGAAGTGGATTTTGCTGGCTGGTTGTGTAAAACCCTGCGGCTGAACCAGCCCAGCACACCCACGCGCACTGCCGTG
TGA

Library Parental gene expression (RPM)
SRP051959_colon 17 .82 RPM
SRP051959_heart 14 .93 RPM
SRP051959_kidney 17 .37 RPM
SRP051959_liver 15 .81 RPM
SRP051959_lung 10 .90 RPM
SRP051959_lymph_node 12 .97 RPM
SRP051959_skeletal_muscle 23 .65 RPM
SRP051959_spleen 12 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000009157 ortholog_one2one 2 retrogenes
retro_ecab_668, retro_ecab_968,
Homo sapiens ENSG00000126934 ortholog_one2one 1 retrogene
retro_hsap_3785,
Gorilla gorilla ENSGGOG00000008832 ortholog_one2many 1 retrogene
retro_ggor_115,
Nomascus leucogenys ENSNLEG00000003013 ortholog_one2one 1 retrogene
retro_nleu_1121,
Otolemur garnettii ENSOGAG00000001658 ortholog_one2one 1 retrogene
retro_ogar_576,
Pan troglodytes ENSPTRG00000010294 ortholog_one2one 1 retrogene
retro_ptro_2566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4061 79.81 52.75
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Download FASTA sequences of all ENSCJAG00000015084 retrocopies