Parental gene:

MCUR1, ENSCJAG00000016050

Aliases:None
Description:mitochondrial calcium uniporter regulator 1 [Source:HGNC Symbol;Acc:21097]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:14863782..14887352(+)


>ENSCJAG00000016050
ATGGACTGCCGCTCCGTCGGGCGTCAGAGGACCCAGCGCCCGCCCGACCGCCGGCGGCTCCTGTTCTTCCTGCCCACGGG
CCGCAGAGGAGGAAGACCGGGCGCCCCCGGAACCTCGGCACGCCGCTGCCTCTCCACGCTCCCCGGCGGACTGGGGGCGC
TGCGCCCTCGCCCCCCTGCGGCCCGCAGCGGCGTGTCCTGTGCCTCCCCGCTGCTCCTCCTCCTGCTCGTGCCCTCCCCC
CGCTTGGCCGCCGCCACCCCGCGCCGGCCGCTCGGGGACTGGGAGCGCTCACGCCTCGGATACGCGGTACCCCCGGTCGG
GCGCAGCGGCGTGTGGAGATGCCCACCGGGCCTCTCCCCGGGTGTCGCCGCTGCCGTCCGCGCCCTTCCCCCGTGCCATA
GCCCGGCGCTCTCACTCGCTTCCTGCAGGAGAGAGCTAAGCCTGTCTGCTGGATGTCTGCAGCTGGAGCGCAGAAGGAGA
GACTTCACCTCTTCTGGGAGTAGGAAGCTCTACTTCGACACTCATGCCTTAGTGTGCTTACTGGAAGACAATGGGTTTGC
TACTCAACAAGCAGAAATCATTGTGTCTGCATTGGTCAAGATCCTGGAGGCCAACATGGACATCGTCTACAAAGATATGG
TCACCAAGATGCAGCAGGAGATCACTCTTCAGCAAATAATGTCTCAGATTGCAAATGTAAAAAAGGATATGATTATTTTG
GAGAAGAGTGAATTTTCAGCCCTCAGAGCCGAAAATGAGAAAATAAAACTCGAACTACATCAGTTAAAACAACAAGTAAT
GGATGAAGTGATCAAAGTCCGAACAGATACCAAATTAGACTTCAACCTGGAAAAGAGCAGAGTAAAAGAATTGTATTCAT
TGAATGAAAAGAAGCTGCTGGAATTGAGAACAGAAATAGTGGCATTGAAGCATGCCCAGCAAGATCGGGCCCTCACCCAG
ACAGATAGGAAGATAGAAACTGAGGTTGCTGGCCTCAAAACCATGCTTGAGTCACACAAGCTTGATAATATTAAATATTT
AGCAGGGTCTATCTTTACGTGCCTAACAGTGGCTCTGGGATTTTATCGCCTGTGGATCTAA

Library Parental gene expression (RPM)
SRP051959_colon 5 .68 RPM
SRP051959_heart 5 .05 RPM
SRP051959_kidney 8 .74 RPM
SRP051959_liver 4 .83 RPM
SRP051959_lung 5 .32 RPM
SRP051959_lymph_node 6 .69 RPM
SRP051959_skeletal_muscle 6 .11 RPM
SRP051959_spleen 5 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000395 ortholog_one2one 2 retrogenes
retro_amel_1628, retro_amel_473,
Canis familiaris ENSCAFG00000009857 ortholog_one2many 3 retrogenes
retro_cfam_1018, retro_cfam_1556, retro_cfam_823,
Callithrix jacchus ENSCJAG00000014547 within_species_paralog 1 retrogene
retro_cjac_219,
Cavia porcellus ENSCPOG00000014899 ortholog_one2one 1 retrogene
retro_cpor_934,
Equus caballus ENSECAG00000009150 ortholog_one2one 2 retrogenes
retro_ecab_273, retro_ecab_469,
Felis catus ENSFCAG00000005972 ortholog_one2one 3 retrogenes
retro_fcat_1290, retro_fcat_1405, retro_fcat_1538,
Homo sapiens ENSG00000050393 ortholog_one2one 1 retrogene
retro_hsap_1795,
Gorilla gorilla ENSGGOG00000002632 ortholog_one2one 1 retrogene
retro_ggor_1320,
Loxodonta africana ENSLAFG00000003287 ortholog_one2one 2 retrogenes
retro_lafr_1252, retro_lafr_870,
Microcebus murinus ENSMICG00000000183 ortholog_one2one 2 retrogenes
retro_mmur_280, retro_mmur_580,
Myotis lucifugus ENSMLUG00000010975 ortholog_one2one 1 retrogene
retro_mluc_1574,
Mustela putorius furo ENSMPUG00000000698 ortholog_one2one 1 retrogene
retro_mputfur_640,
Nomascus leucogenys ENSNLEG00000000914 ortholog_one2one 1 retrogene
retro_nleu_2768,
Otolemur garnettii ENSOGAG00000013458 ortholog_one2one 3 retrogenes
retro_ogar_1587, retro_ogar_1819, retro_ogar_3178,
Pan troglodytes ENSPTRG00000017740 ortholog_one2one 1 retrogene
retro_ptro_1200,
Tarsius syrichta ENSTSYG00000012562 ortholog_one2one 1 retrogene
retro_tsyr_810,
Tursiops truncatus ENSTTRG00000012874 ortholog_one2one 1 retrogene
retro_ttru_1597,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2522 81.73 56.28
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Download FASTA sequences of all ENSCJAG00000016050 retrocopies