Parental gene:

SEC11A, ENSCJAG00000016146

Aliases:None
Description:SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:22089689..22135167(+)


>ENSCJAG00000016146
ATGCTGTCTCTAGACTTTTTGGACGATGTGCGGCGGATGAACAAGCGGCAGCTCTATTACCAAGTCCTAAATTTTGGAAT
GATTGTCTCATCGGCACTAATGATCTGGAAGGGATTAATGGTAATAACTGGAAGTGAAAGTCCAATTGTAGTGGTGCTCA
GTGGCAGCATGGAACCTGCATTTCATAGAGGAGATCTTCTCTTTCTAACAAACCGAGTTGAAGATCCCATAAGAGTGGGA
GAAATTGTTGTTTTTAGGATAGAAGGAAGAGAAATTCCTATAGTTCACCGAGTCTTGAAGATTCATGAAAAGCAAAATGG
ACATATCAAGTTTTTGACCAAAGGCGATAATAATGCAGTTGATGACCGAGGCCTCTATAAACAAGGACAACATTGGCTAG
AGAAAAAAGATGTGGTGGGGAGAGCCAGGGGATTTGTTCCTTACATTGGAATTGTGACGATCCTCATGAATGACTATCCT
AAATTTAAGTATGCAGTGCTCTTTTTGCTGGGTTTATTTGTGCTGGTCCACCGTGAGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 15 .95 RPM
SRP051959_skeletal_muscle 12 .08 RPM
SRP051959_lymph_node 15 .57 RPM
SRP051959_lung 14 .79 RPM
SRP051959_liver 16 .35 RPM
SRP051959_kidney 18 .97 RPM
SRP051959_heart 11 .14 RPM
SRP051959_colon 14 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012889 ortholog_one2one 1 retrogene
retro_cfam_1416,
Felis catus ENSFCAG00000029786 ortholog_one2one 2 retrogenes
retro_fcat_1178, retro_fcat_1908,
Homo sapiens ENSG00000140612 ortholog_one2one 1 retrogene
retro_hsap_4058,
Gorilla gorilla ENSGGOG00000011129 ortholog_one2one 1 retrogene
retro_ggor_2726,
Monodelphis domestica ENSMODG00000019364 ortholog_one2one 1 retrogene
retro_mdom_726,
Pongo abelii ENSPPYG00000006881 ortholog_one2one 1 retrogene
retro_pabe_3333,
Pan troglodytes ENSPTRG00000007404 ortholog_one2one 1 retrogene
retro_ptro_2751,
Tupaia belangeri ENSTBEG00000012320 ortholog_one2one 3 retrogenes
retro_tbel_1139, retro_tbel_2280, retro_tbel_745,
Tursiops truncatus ENSTTRG00000005833 ortholog_one2one 1 retrogene
retro_ttru_1237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1496 76.14 96.65
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Download FASTA sequences of all ENSCJAG00000016146 retrocopies