Parental gene:

SEC11A, ENSMODG00000019364

Aliases:None
Description:SEC11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17718]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:112234618..112272396(-)


>ENSMODG00000019364
ATGAAAGGCGGGGCCTTGTGGGTTTGGTTCCCGGGTGGGAGTGGCCTGCGTAGGGCTAGGTCGCACGTTCTCCCCGTTTT
TCTTTGTCTTCCTCCCCCGTCCTGCAGTGCGGGGTGGGCCCGGCAGCCCGGAAGCGGAAGTGTGGGGCACCCAGGGTGGG
GCGGTCCTGAGTGTGTACCGCCTACACGCCGGTCCGGCCGCTGCCCTCGCTTCCGTCCCGCCCGCGCCATGCTGTCCCTG
GACTTCTTGGACGATGTGCGGCGGATGAACAAGCGGCAGCTATATTATCAAGTCCTAAACTTTGGGATGATCGTCTCTTC
AGCTTTAATGATCTGGAAAGGACTAATGGTAGTAACTGGAAGTGAAAGCCCAATTGTAGTGGTGCTCAGTGGAAGCATGG
AACCTGCATTTCACAGAGGAGATCTCCTCTTTTTAACCAATCGAATTGAAGATCCCATAAGAGTAGGAGAGATTGTTGTC
TTTAAGATAGAAGGAAGGGAAATTCCAATTGTTCACCGAGTGTTGAAAATTCATGAAAGGCAAGATGGACATATCAAGTT
TTTGACCAAAGGAGACAATAATGCTGTTGATGATCGAGGACTATATAAGCAAGGGCAGCTCTGGCTAGAGAAGAAGGATG
TAGTAGGACGAGCAAGAGGATTTGTTCCTTATATTGGAATTGTGACGATTCTTATGAATGACTATCCTAAATTTAAGTAT
GCAGTCCTCTTTTTACTGGGTTTATTTGTGCTGGTCCATCGGGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 50 .54 RPM
SRP007412_cerebellum 48 .32 RPM
SRP007412_heart 103 .46 RPM
SRP007412_kidney 123 .78 RPM
SRP007412_liver 158 .60 RPM
SRP007412_testis 83 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012889 ortholog_one2one 1 retrogene
retro_cfam_1416,
Callithrix jacchus ENSCJAG00000016146 ortholog_one2one 1 retrogene
retro_cjac_1496,
Erinaceus europaeus ENSEEUG00000015328 ortholog_one2one 2 retrogenes
retro_eeur_314, retro_eeur_412,
Felis catus ENSFCAG00000029786 ortholog_one2one 2 retrogenes
retro_fcat_1178, retro_fcat_1908,
Homo sapiens ENSG00000140612 ortholog_one2one 1 retrogene
retro_hsap_4058,
Gorilla gorilla ENSGGOG00000011129 ortholog_one2one 1 retrogene
retro_ggor_2726,
Macaca mulatta ENSMMUG00000011486 ortholog_one2one 1 retrogene
retro_mmul_2343,
Monodelphis domestica ENSMODG00000020427 within_species_paralog 2 retrogenes
retro_mdom_1517, retro_mdom_377,
Oryctolagus cuniculus ENSOCUG00000008205 ortholog_one2one 1 retrogene
retro_ocun_849,
Otolemur garnettii ENSOGAG00000007281 ortholog_one2one 1 retrogene
retro_ogar_3315,
Pongo abelii ENSPPYG00000006881 ortholog_one2one 1 retrogene
retro_pabe_3333,
Pan troglodytes ENSPTRG00000007404 ortholog_one2one 1 retrogene
retro_ptro_2751,
Ictidomys tridecemlineatus ENSSTOG00000019948 ortholog_one2one 1 retrogene
retro_itri_206,
Tupaia belangeri ENSTBEG00000012320 ortholog_one2one 3 retrogenes
retro_tbel_1139, retro_tbel_2280, retro_tbel_745,
Tursiops truncatus ENSTTRG00000005833 ortholog_one2one 1 retrogene
retro_ttru_1237,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_726 91.12 66.27
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Download FASTA sequences of all ENSMODG00000019364 retrocopies